G68057



Basic Information


Item Value
gene id G68057
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2696808 ~ 2701159 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU85010
GTGAGAGGGAAGAGGTGGAGTCTGCGGCACAGTCCACTGGGTTACTCTCCAAGAGTAGCCAGAGTATCGCAGTGGATTCTCCAGCTGGGTGTGGGGTCTATGCAGAGACTGAATCCACAGTTTAGTAAGAAGCCTTCAGCCTGAAACAATGAAGACTGTTCCTGTGGCTCAAGGTCAATCCTGCAGATGTTAATATGAAACCAGATGATATTGTAGATCTTGTCCAACCAGGAGCAGCGGATGAGACACACTGCAGAGGCAAGGAGCGCATCCGGGTACTTCCCGTCACTTCCTCGGTCGGACTTGGGAATTGGGTGAACACTGTTAATACTGGGGGAGACGCGCCCCCTACACCTATGCAGCCGGGCCTACATTATAGTTCTCTAAACATTGGGAGTGACGTGTCCCCGCCAAACCTACACGTATTCCTGGGACTGACCGCAGTGTAGTCTCTTTATTGTGCGTCATGGATCTCAGGATCTCTGATGGTCCCGAACGTGGGAGCAAATGCCATGAAGAAAAAGTGCACGAAATAGTATTTGTTTCCGTGAGCTGGGATAATATTCACAAACTTTGAATTGTTAATTCATTTCGTAATTTCAGgtaaaatactactaataaaaacctaaatgtgtgtgttgccttATCTGTTTCCCCAAGTAAGATGGAAACTATATTTGCATATTGCTGCGCAGAGGCGGGGCTGAGAAGAGGCATATAAGGCCAGGAGCCATTAGGAGTGTATTTGTAGCAAGTATTTGTAGCAAACAGGGAGGCACTGTTAAAGCCTACATATTATATAACCCACCGTCCGCCCcctaaatacatacacatacacatacaaacatgcatatGTTAGTTTTGCAGTGAGATCTGAGTGCTAAGATTGAGAAAGGGCGGAAAGTGAATGTACCTCTTGTGCTGTCCAATAAAgcccagttttgttttggaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU85010 True 953 lncRNA 0.46 2 2696808 2701159

Neighbor


gene id symbol gene type direction distance location
AMCG00014142 NA coding downstream 21398 2667981 ~ 2675410 (-)
AMCG00014145 NA coding downstream 61492 2631658 ~ 2635316 (-)
AMCG00014143 NA coding downstream 81278 2615255 ~ 2615530 (-)
AMCG00014141 NA coding downstream 120005 2574463 ~ 2576803 (-)
AMCG00014131 NA coding downstream 126417 2562533 ~ 2570391 (-)
AMCG00014150 NA coding upstream 30372 2731531 ~ 2734872 (-)
AMCG00014151 NA coding upstream 44186 2745345 ~ 2751995 (-)
AMCG00014155 piga,LOC106582142,LOC102779826 coding upstream 149253 2850412 ~ 2868349 (-)
AMCG00014153 NA coding upstream 169302 2870461 ~ 2879884 (-)
AMCG00014156 LOC102310267 coding upstream 179355 2880514 ~ 2892222 (-)
G67953 NA non-coding downstream 88329 2608269 ~ 2608479 (-)
G67911 NA non-coding downstream 323479 2350125 ~ 2373329 (-)
G67881 NA non-coding downstream 637317 2056849 ~ 2059491 (-)
G67849 NA non-coding downstream 754388 1942027 ~ 1942420 (-)
G67818 NA non-coding downstream 875049 1820612 ~ 1821759 (-)
G68061 NA non-coding upstream 6658 2707817 ~ 2710329 (-)
G68070 NA non-coding upstream 57326 2758485 ~ 2758840 (-)
G68073 NA non-coding upstream 64031 2765190 ~ 2766174 (-)
G68076 NA non-coding upstream 68679 2769838 ~ 2770660 (-)
G68077 NA non-coding upstream 75100 2776259 ~ 2805164 (-)
AMCG00014144 NA other downstream 43561 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 154111 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 571855 2085941 ~ 2124953 (-)
G67843 NA other downstream 778626 1916727 ~ 1918182 (-)
G67832 NA other downstream 794193 1900640 ~ 1902615 (-)
G68088 NA other upstream 124403 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 684598 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 2957913 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 3358330 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 4676929 7378088 ~ 7386984 (-)

Expression



Co-expression Network