G68151


Basic Information

Item Value
gene id G68151
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3224574 ~ 3226499 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85148
GTCCTCATCCTGTCCTTAGAGGGAGTGGAGACCAAGTAAAttggtttgaaaataaaaaagataaacgGTGAAAGCAGCTCCTGAACTTGTCTGTGTGAAGCCATCCAGTGACAGGAACAAAACGATGTTGTGCATGCCTGACTCATCGTGTCCCTACCGACATCCAGCTACAGGAGACATTGTTTCCACTGTAAACATCTAGTGTCGGTTGCCAGTAATCAATCTCGGCAGATCACATTCATACGCTGTCAAATTCTGCTCCGAGTTCGTGTCGGATCAGTTTAAATACGGCACACGTTCTAGTTTCCATGCATGTTCGAAGGCGACAATAACTGAAAACACTTCAAATCGGCCAGGGTGTGAGTTACAGCTCTTGGGGAAGAAGAGAACACTATTTATGAAATTGAGAAAAGGGAATTTCAGTCTTAGACCATATcgtgtctgtctgttttccaGAGTGTTCTTTCATAGCGCCTGTCATTGCGATTAAGGAAGTGGTCTTCAACACAGGCATGAAGGGAGCATTAGAGCAGATAATGTATCCCAATATTCGCCCAGTTTGGCAAAGACAGAACTGACGGACAATGCCGACTGAAAGCCACATGTTTATTTTAGGAAACTGCTGGGTAGGGAATATATTTGACGAGACAATTCGGCTGTGTGGCACTTGAAACTATAGACGTCATTAATATAAAATCTACAATTTCCCTCGAAGTGGCGAAGTGGCTTTATTTTCCAGTGCAGTGGCACGAGGCTTCAAGGGTCTGAATGCCAGTAAAGTCACTGTTTCCTGGTTGTGAACGAGCCTGGCGTTAAGATGGTGAAATGCCAGGGCTGTTCTTCGCCCCACACCCAAGGGGCAAGACCTGCGAGTCCAGCTCGAGGGTGGGAAAGTCGCGGCTCTCTGAAACGCAGCGATCTTACCTGAACACGAACACTGATCTGTGCCAAGTCTCTTCTGCGTCTCTGTCAAGTGTCCATGTTTGTTGGGAACGGCACAATATCCTTAGAAAGCCCTGCTAGTTCACCTTAACAGTCCTGGTCACAGCAGCGTTCGAAGGGGAAGCTTTCAGTGGGTTCAGATCAACAGTGAGGCGAGTGACGCAGAACTGGGGGGGGAATTCCAGGAGGACAGGGTGCAGTATCTTCTGACTTCTGCTCCATCTTCAGGCTCCAGTTTATTATTGCAATGATTCGATCTGATCTGCATCCCACCCCTCTCCCCCGTTTCAGAACATTTCGTACGCATCTGCATATCTGACGTGCGTCGCTCTCAGAAGGGACTGCCTCGGTGCAGAGCCAGCTCAATACATCAATACGTTTTTCACGGAGCTCTACAGCTCTGTCTTCGGTATTATAATGACTCTTTACTTTACCCCTGGGTGGCACTGCCTTTACAGTGTGTAGCTGCTTCTTATGTGTGTgcggatgtatttatttattctatatttGCCTGGACCGGACATGCGTGTACAGATCTGTTGGACTGACGTCGTGTGGCTGTATGTGGAGCAGGGCCCTCGTCCTGCCGTTCGACCCGTGCGTACGTGCTGTCGTTGTCTAGGCTAGAGACAGCCCTTGCTGATCGATGTCACGCGAGAGGCAGTGATTTTGTATGCATTGATATTTGGGTACTGAATGAAGATTTTATACTAATAACCACATGATGGTTCACATTTTTTTAACGATGCGCTGGGAAAAGTGAcgtgaatgaaaataaaaatggttcaGCAGTCCTGTGTGTCCGCTTCATTATTTGACTTTAACTCCTCACAGCCGTGTTTCTACAGGGGACGACGGATCAAGCTGAAATGAGTTTGGGTCGATCTGAAAACCGGATAGTTGCGAAGGTTTTGGCGACTCTTTAATGACTGTACACAACAATCTTCAGAGGCGCCTCCTCTAGTGCTCTACTGTCAATAACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85148 True 1926 lncRNA 0.47 1 3224574 3226499

Neighbor

gene id symbol gene type direction distance location
AMCG00014165 NA coding upstream 2653 3220203 ~ 3221921 (+)
AMCG00014166 NA coding upstream 48519 3171834 ~ 3176055 (+)
AMCG00014164 NA coding upstream 58357 3149895 ~ 3166217 (+)
AMCG00014162 nhs,LOC103378685 coding upstream 179829 3044338 ~ 3044745 (+)
AMCG00014163 NA coding upstream 193871 2996445 ~ 3030703 (+)
AMCG00014171 NA coding downstream 112853 3339352 ~ 3370944 (+)
AMCG00014170 NA coding downstream 151193 3377692 ~ 3378273 (+)
AMCG00014174 LOC108425737 coding downstream 165108 3391607 ~ 3397123 (+)
AMCG00014175 NA coding downstream 171792 3398291 ~ 3409107 (+)
AMCG00014176 NA coding downstream 207658 3434157 ~ 3452490 (+)
G68046 NA non-coding upstream 248064 2976214 ~ 2976510 (+)
G67994 NA non-coding upstream 422530 2782339 ~ 2802044 (+)
G67997 NA non-coding upstream 426765 2792742 ~ 2797809 (+)
G67988 NA non-coding upstream 455737 2767502 ~ 2768837 (+)
G67983 NA non-coding upstream 469090 2746244 ~ 2755484 (+)
G68153 NA non-coding downstream 360 3226859 ~ 3228126 (+)
G68166 NA non-coding downstream 148338 3374837 ~ 3375148 (+)
G68167 NA non-coding downstream 149086 3375585 ~ 3375789 (+)
G68189 NA non-coding downstream 184479 3410978 ~ 3483649 (+)
G68292 NA non-coding downstream 727867 3954366 ~ 3955265 (+)
AMCG00014146 NA other upstream 514245 2706840 ~ 2710329 (+)
G67896 NA other upstream 1094429 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1321887 1900220 ~ 1902687 (+)
G67801 NA other upstream 1343533 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1386449 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 900977 4127476 ~ 4131718 (+)
G68475 NA other downstream 1422701 4649200 ~ 4651964 (+)
G68830 NA other downstream 4119696 7346195 ~ 7349467 (+)
G68848 NA other downstream 4187141 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4238004 7464503 ~ 7482560 (+)

Expression


Co-expression Network