G68153


Basic Information

Item Value
gene id G68153
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3226859 ~ 3228126 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85150
agtatggcacagttaaaaaagaaaggaaaatcttCATAATATGTTGAAGGGTAAACAGAATACAGTCAAATGTAGGTTTGATTACAATAAAATCCCAATCACTAAATTACATAGAAAAGTCCTGGACTAATAAACAAAAGCTACTGAAACCTGaggaatatgaaaataaagcaagGCCATTTCAGTCAAGTACTGTTAAGGAGTATCTGTCTGTGAAATAAACGCACTGAAGTATAAAAGGCAGTAAGAAACATTGTCTACAGCTTTCTCTAATGAAATGTTCCGGTCTtctaaaatttattttttttgtatataggattagtttaaaatatttattttctacaaaaatgtacattcttgTCCCTGAAATTTATGGTTAAACCCATAAAAATGCCAAGGcttgatagtaataataacaataataataataataataatgatatgaCCCAGAGCTGGGGATCCCTGGGGTGTCGGGCTGTGATAGTTTCATGTCTATAAGAGAGACAAGCGTCTGACGGCCCTCGAACCCCGTctaaaaaaacaggaagtggaaactGGCTGGGAAATAAATAGCACCATCATCGCAACGGGAAGAAGAACCCACTGTGTGGACATGAAGTCTGTCCGTCCGTCCAGCGCTTTACGGCAGTGTACGACAGCTCCCATCTCGTTATAAAATAAGGGTTGTTTGAACGAGTGCAAAGTAACTCTGTCTCTCCAGCGCAGGAAGAACGGACAGCCTGACTGTAGCATGACGAGGTTTTacacactttaaaaagaaaacattaaaaacactcttTCAAACTGCATAGTCATCAGAGTTTGGATGTAAATATGAACGTGAGAACTGATGCTGACAGTGCAATCACATCTTTAGGAAATGTCAGTCAAAGGAGACACACCGGGACTCCCCCCCCCACTAATCTCCTGCCGCCCTTATTTCAGATCTGAACACTTTCCTTCAGCGTCTGACCCCCCAGAGTCCACGGCGCCGTATCTTCAGAAACACGTCCAGATCAGAACAATTCAGTCAGAACTTCAGAAATtgatttaaatcaattatttcgGCCAAGATATAAAACAGCTTAACACCCAGTAGGCCTCTGTGGGCTGTCAGGCCCTGGGCTGCTTTTTCCGGCGACCGCAGGGCGGGGGGTTCGAGTCCTCGGTCCGCCTGCACTCTctgaacacacagacagacctcTGTCCCCCGAGGGCTTTTGAAAGAGTTTCATAAAACGATGGCAACCCTTAGTTTAGTGAAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85150 True 1268 lncRNA 0.42 1 3226859 3228126

Neighbor

gene id symbol gene type direction distance location
AMCG00014165 NA coding upstream 4938 3220203 ~ 3221921 (+)
AMCG00014166 NA coding upstream 50804 3171834 ~ 3176055 (+)
AMCG00014164 NA coding upstream 60642 3149895 ~ 3166217 (+)
AMCG00014162 nhs,LOC103378685 coding upstream 182114 3044338 ~ 3044745 (+)
AMCG00014163 NA coding upstream 196156 2996445 ~ 3030703 (+)
AMCG00014171 NA coding downstream 111226 3339352 ~ 3370944 (+)
AMCG00014170 NA coding downstream 149566 3377692 ~ 3378273 (+)
AMCG00014174 LOC108425737 coding downstream 163481 3391607 ~ 3397123 (+)
AMCG00014175 NA coding downstream 170165 3398291 ~ 3409107 (+)
AMCG00014176 NA coding downstream 206031 3434157 ~ 3452490 (+)
G68151 NA non-coding upstream 360 3224574 ~ 3226499 (+)
G68046 NA non-coding upstream 250349 2976214 ~ 2976510 (+)
G67994 NA non-coding upstream 424815 2782339 ~ 2802044 (+)
G67997 NA non-coding upstream 429050 2792742 ~ 2797809 (+)
G67988 NA non-coding upstream 458022 2767502 ~ 2768837 (+)
G68166 NA non-coding downstream 146711 3374837 ~ 3375148 (+)
G68167 NA non-coding downstream 147459 3375585 ~ 3375789 (+)
G68189 NA non-coding downstream 182852 3410978 ~ 3483649 (+)
G68292 NA non-coding downstream 726240 3954366 ~ 3955265 (+)
G68317 NA non-coding downstream 855637 4083763 ~ 4083964 (+)
AMCG00014146 NA other upstream 516530 2706840 ~ 2710329 (+)
G67896 NA other upstream 1096714 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1324172 1900220 ~ 1902687 (+)
G67801 NA other upstream 1345818 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1388734 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 899350 4127476 ~ 4131718 (+)
G68475 NA other downstream 1421074 4649200 ~ 4651964 (+)
G68830 NA other downstream 4118069 7346195 ~ 7349467 (+)
G68848 NA other downstream 4185514 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4236377 7464503 ~ 7482560 (+)

Expression


Co-expression Network