G68167


Basic Information

Item Value
gene id G68167
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3375585 ~ 3375789 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85168
GCCAACAGTAATCCTGCAATCCTCCTCAAATCTGCAAATGTCACAAATGTGCCCGACTGACAGGCTCAATCTGGAGATGAAAATGATCTCTCGGGGAGTACACACAGTGGTGGTGACCCTGTACGGTGCACATCTGTAACCAAACTCAAAAGACAAGGAAATCGTAAAGCCTAACTCTCTCCCTCACCATGATGTAAGCCCAGCG

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU85168 True 205 lncRNA 0.48 1 3375585 3375789

Neighbor

gene id symbol gene type direction distance location
AMCG00014171 NA coding upstream 4641 3339352 ~ 3370944 (+)
AMCG00014165 NA coding upstream 153664 3220203 ~ 3221921 (+)
AMCG00014166 NA coding upstream 199530 3171834 ~ 3176055 (+)
AMCG00014164 NA coding upstream 209368 3149895 ~ 3166217 (+)
AMCG00014162 nhs,LOC103378685 coding upstream 330840 3044338 ~ 3044745 (+)
AMCG00014170 NA coding downstream 1903 3377692 ~ 3378273 (+)
AMCG00014174 LOC108425737 coding downstream 15818 3391607 ~ 3397123 (+)
AMCG00014175 NA coding downstream 22502 3398291 ~ 3409107 (+)
AMCG00014176 NA coding downstream 58368 3434157 ~ 3452490 (+)
AMCG00014173 rbbp7,LOC105893332,LOC108438657 coding downstream 86279 3462068 ~ 3471988 (+)
G68166 NA non-coding upstream 437 3374837 ~ 3375148 (+)
G68153 NA non-coding upstream 147459 3226859 ~ 3228126 (+)
G68151 NA non-coding upstream 149086 3224574 ~ 3226499 (+)
G68046 NA non-coding upstream 399075 2976214 ~ 2976510 (+)
G67994 NA non-coding upstream 573541 2782339 ~ 2802044 (+)
G68189 NA non-coding downstream 35189 3410978 ~ 3483649 (+)
G68292 NA non-coding downstream 578577 3954366 ~ 3955265 (+)
G68317 NA non-coding downstream 707974 4083763 ~ 4083964 (+)
G68374 NA non-coding downstream 917537 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 919028 4294817 ~ 4295819 (+)
AMCG00014146 NA other upstream 665256 2706840 ~ 2710329 (+)
G67896 NA other upstream 1245440 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1472898 1900220 ~ 1902687 (+)
G67801 NA other upstream 1494544 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1537460 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 751687 4127476 ~ 4131718 (+)
G68475 NA other downstream 1273411 4649200 ~ 4651964 (+)
G68830 NA other downstream 3970406 7346195 ~ 7349467 (+)
G68848 NA other downstream 4037851 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4088714 7464503 ~ 7482560 (+)

Expression


Co-expression Network