G68189


Basic Information

Item Value
gene id G68189
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3410978 ~ 3483649 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85192
tttttaaaacaggtttcGTCCTTTAATGAGCCGAACTGTCAAGGATACAGCAGTAACACGGGATGGAGAATGCAGAGATACACATGGCGACTGCAAGAGACGAGACACGCAGACGCCAGGACAGCCAGGGGAACACTTATGCCCTAACTACAGTGGAGCTGaggtacagacacacacacaacggaCACAGAAGCGCTGCTATTACAGATCGGACAGCACAGACACTGCATTgagaagctgtttttatttgtgtgtcctGGCGTAGGTCCCTTTGGAGATGTCCGCACTGCACGAGGCTCAATATTACActctaaaagaaagaaaacgggATACCACAGAATATATGAACCactacactgaaataaatatgagGAGGTAAGTGACAGGTAACACTGTGAACCAGGCTGGCTCAGAGAATGTATTTGAAGGATCTTATCCACCATGCAGCTGAATATTGGCAGTTTTTAGTTTcctcctttttaaaatgaattcctACCCTGTTATTGTAGTTGATGTCAGTTTGAAGGACATCTGGGAACCCAAGTCCAGCTATCAATGCCACCCAGAAACCAGAAGAACCCTCATCCAAAATACAATCTACATGCTTTAacttgtctatttatttttgttctaaaCAGAAATGGATAAATAATGTTACTGGCATCCGTacctaataaaacaaaatgacaatgaGGTAATCATTGAGTGATGGAACTGCAATAAAGCAGAGAGCAGATAATGAAACACACCCTGGGCTTTCATGTTTAAACCACAGTATTCACTCAACCGTTATTCCAAAATAATTTCTTGTCAGACTAacaacacatatataaatgatgCAACCAAACAGGCACTTATTGAACATAGTGTGACCGTATCACCCCAGAGACGTCCTGCCTCATGAACAGACtgtgaacagaacaaaacaattcaatcaTCAAGTAAATGGACCTTCCAATATGACAATAAAAACCATTCTACATGCTTCACATAGTTTTCAAGGCAGTTACAGTTGTGCCCTGATTCAATAGATTAAAACAacactaaataataattaccCTCTGTGCAACGAGTGGCCGAATACTGTAAAAATGTCTCATTAAACTAAaactccagacacacacacacacacaaatacacccTCTACTGCATCAGACAGCTGGTGTTTGGAAGGAAGTCCTGGACGTAGGTCGCCACTGCTTTGGAGAGGTAAGTCATGGTGCCGTAGCTGCCGCTGGGGGCGCTGTCGTAGAAAAAGGTGCAGATCCCCGTGGCCGGGTCCTGCTCCAGGAAATACTCGCCGGCTCCGTGCACTTTCTGCAACGAGAGGGGAGAAGGCATGAGCTTACAGCCGCCTGGGCCGGTGTCTCAGAGACGGGACAGCGCTGTCACCTCCCTGACAtggcgagagggagagaTCCGGGCGCCCgggtctctccctctcctctaaCCGTCcgcctgcagcagctcctcgaTCTCCTTGTCCCAGTTGTCGTCCCTGTTCTCGGCCTCCGCCACGACTTCGTACTCCTGGAGCTCCTGCTGCAGCTCCTTCTCCCAGTCCGCCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85192 True 1570 lncRNA 0.46 2 3410978 3483649

Neighbor

gene id symbol gene type direction distance location
AMCG00014175 NA coding upstream 1871 3398291 ~ 3409107 (+)
AMCG00014174 LOC108425737 coding upstream 13855 3391607 ~ 3397123 (+)
AMCG00014170 NA coding upstream 32705 3377692 ~ 3378273 (+)
AMCG00014171 NA coding upstream 40034 3339352 ~ 3370944 (+)
AMCG00014165 NA coding upstream 189057 3220203 ~ 3221921 (+)
AMCG00014184 NA coding downstream 5830 3489479 ~ 3511658 (+)
AMCG00014182 NA coding downstream 43368 3527017 ~ 3554734 (+)
AMCG00014183 NA coding downstream 75269 3558918 ~ 3559709 (+)
AMCG00014188 NA coding downstream 98970 3582619 ~ 3582945 (+)
AMCG00014187 NA coding downstream 111446 3595095 ~ 3615081 (+)
G68167 NA non-coding upstream 35189 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 35830 3374837 ~ 3375148 (+)
G68153 NA non-coding upstream 182852 3226859 ~ 3228126 (+)
G68151 NA non-coding upstream 184479 3224574 ~ 3226499 (+)
G68046 NA non-coding upstream 434468 2976214 ~ 2976510 (+)
G68292 NA non-coding downstream 470717 3954366 ~ 3955265 (+)
G68317 NA non-coding downstream 600114 4083763 ~ 4083964 (+)
G68374 NA non-coding downstream 809677 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 811168 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 1017215 4500864 ~ 4550002 (+)
AMCG00014146 NA other upstream 700649 2706840 ~ 2710329 (+)
G67896 NA other upstream 1280833 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1508291 1900220 ~ 1902687 (+)
G67801 NA other upstream 1529937 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1572853 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 643827 4127476 ~ 4131718 (+)
G68475 NA other downstream 1165551 4649200 ~ 4651964 (+)
G68830 NA other downstream 3862546 7346195 ~ 7349467 (+)
G68848 NA other downstream 3929991 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3980854 7464503 ~ 7482560 (+)

Expression


Co-expression Network