G68475


Basic Information

Item Value
gene id G68475
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4649200 ~ 4651964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85565
TGGCGCAAGATGACGGCTGCGGTTTGCAGTGCAGTTACAGTTACAAATTAATGGAAGAGAGACAAACGCAACGAGGATTTATTAGTTACATGTATAGTATTCGTGCTCGGGTCTGTGTTGTACGTTGGCCACCATGGGATGTAATATGTGATCAGCGTCATATTTAACACAACTGCAGCGCGCATCTGTGATGGTGTCTGAGTCCCACGGTTTGTTGTGACTGGGAGAAAACAGGTATTTCAAGATCTTCCGGGTTATTCCGATGGACACTTTGCAAGAAACGAGTATTCGCTTCTCTGTGCTGGTTGATATTTGTTAAAACAGTTGTGCGTCTTCTGGTCAAACATGGGCAAAGGCAAGGAGACCTCTTTGGATTTGCGGCAGAAGGTGATCGACTTGAAGAAGAAGGAACATCTGGGATACAAGTCCATAGCCAAGAAGCTGAACATGCCCCTGTCCACCGTGAGGAGCATCGTGAAGAAGTACGACTCGACCGGACTGGTGGAGAACATCAGGAGGACTGGGAGGCCGCAGAAGCTCCCGGACGGGGTCCAGCAGTACCTGCTCACCCAGGTGATGAAGGAGAAGCACAGCCCcgcggaggaggaggatgaggagcaGCGTGTGCTGGACACTGCGGAGGTGACCACCGCCACCGCGGACAGATGCGCAGACCTTGATCACTCTAAGGCCCGCGAGTGAAGGTCAGGGAGCGTCAGCAGCTCAGCCTGCAGGACGAGGGCCGAACGCAGGGACGGAGCGTGTTCCAGTCCCGTAATGTCCTCTAGCAAGACGCCCGACATTAGACAAACTGACGACGCAAGGCGTGGTCTGCACCCTGATTTCTGAGACTCTGCTTTACAACATACAATGAGATAACGTACCCGTCCTTCTAATGCAGATGGTTAGTTTTGAGtaattcttaaaacaaatatattgcattttcatgGATTGATGGTATGAAACCCAAGAAGGTGGTGTACGACCAAATGGGATTGTGAGAAATGATCAGAACCTCCAATAATGACAGCAGGTGATCAATATGCTTTTCCGAGCGTGTTCGATCCTAGTTGAGTCTGCTGCTGAGAGACGGTGTGGTTCCAGGGTCCTGCTTTCTCACTGGACTTCCCTCCCTCTTGGCTGTGTCGGTTCTGTCGTATGATGCACATTGTGACGATTTCTTCTCTACCCATGGAGTTATGTCTGGCTTAGCACCACCAGTGGGAGAGGGGTGACTGAACCGGGCTCTCACGATAACACGTGTGTCATGTTCCTTGCAGTTGCTGACAAGGTCACAGATGAAATCTACAACCCTGGTACTCGGGTTGGACATATTACTATAATATATGTTGCTAGTTTTAAGCTTTCGACTATAACCTCTTGCGCCTGAATATTAATTCGTACAAGGAGAATATTATCTTACGTGACCATGCAAGGGCAGTTGTCATTGTCATTCGATCTCTAAATCTCTTTTACTCTGGACTCTTTAGCTGAGTCCAAGAATCATAtatgtattctctctctctctctctctctctctctctctctctctctctctctctcatatttcacaactcaataaaacaataaaa
>TU85567
TGGCGCAAGATGACGGCTGCGGTTTGCAGTGCAGTTACAGTTACAAATTAATGGAAGAGAGACAAACGCAACGAGGATTTATTAGTTACATGTATAGTATTCGTGCTCGGGTCTGTGTTGTACGTTGGCCACCATGGGATGTAATATGTGATCAGCGTCATATTTAACTCTGAGTCCCACGGTTTGTTGTGACTGGGAGAAAACAGGTATTTCAAGATCTTCCGGGTTATTCCGATGGACACTTTGCAAGAAACGAGTATTCGCTTCTCTGTGCTGGTTGATATTTGTTAAAACAGTTGTGCGTCTTCTGGTCAAACATGGGCAAAGGCAAGGAGACCTCTTTGGATTTGCGGCAGAAGGTGATCGACTTGAAGAAGAAGGAACATCTGGGATACAAGTCCATAGCCAAGAAGCTGAACATGCCCCTGTCCACCGTGAGGAGCATCGTGAAGAAGTACGACTCGACCGGACTGGTGGAGAACATCAGGAGGACTGGGAGGCCGCAGAAGCTCCCGGACGGGGTCCAGCAGTACCTGCTCACCCAGGTGATGAAGGAGAAGCACAGCCCcgcggaggaggaggatgaggagcaGCGTGTGCTGGACACTGCGGAGGTGACCACCGCCACCGCGGACAGATGCGCAGACCTTGATCACTCTAAGGCCCGCGAGTGAAGGTCAGGGAGCGTCAGCAGCTCAGCCTGCAGGACGAGGGCCGAACGCAGGGACGGAGCGTGTTCCAGTCCCGTAATGTCCTCTAGCAAGACGCCCGACATTAGACAAACTGACGACGCAAGGCGTGGTCTGCACCCTGATTTCTGAGACTCTGCTTTACAACATACAATGAGATAACGTACCCGTCCTTCTAATGCAGATGGTTAGTTTTGAGtaattcttaaaacaaatatattgcattttcatgGATTGATGGTATGAAACCCAAGAAGGTGGTGTACGACCAAATGGGATTGTGAGAAATGATCAGAACCTCCAATAATGACAGCAGGTGATCAATATGCTTTTCCGAGCGTGTTCGATCCTAGTTGAGTCTGCTGCTGAGAGACGGTGTGGTTCCAGGGTCCTGCTTTCTCACTGGACTTCCCTCCCTCTTGGCTGTGTCGGTTCTGTCGTATGATGCACATTGTGACGATTTCTTCTCTACCCATGGAGTTATGTCTGGCTTAGCACCACCAGTGGGAGAGGGGTGACTGAACCGGGCTCTCACGATAACACGTGTGTCATGTTCCTTGCAGTTGCTGACAAGGTCACAGATGAAATCTACAACCCTGGTACTCGGGTTGGACATATTACTATAATATATGTTGCTAGTTTTAAGCTTTCGACTATAACCTCTTGCGCCTGAATATTAATTCGTACAAGGAGAATATTATCTTACGTGACCATGCAAGGGCAGTTGTCATTGTCATTCGATCTCTAAATCTCTTTTACTCTGGACTCTTTAGCTGAGTCCAAGAATCATAtatgtattctctctctctctctctctctctctctctctctctctctctctctctcatatttcacaactcaataaaacaataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85565 True 1592 TUCP 0.48 2 4649200 4651964
TU85567 False 1564 TUCP 0.48 3 4649200 4651964

Neighbor

gene id symbol gene type direction distance location
AMCG00014208 NA coding upstream 65991 4568669 ~ 4583209 (+)
AMCG00014209 NA coding upstream 100793 4520802 ~ 4548407 (+)
AMCG00014207 LOC108443135,LOC102799111 coding upstream 150244 4460775 ~ 4498956 (+)
AMCG00014202 NA coding upstream 332521 4298341 ~ 4316679 (+)
AMCG00014201 rab9a,LOC106581920 coding upstream 357651 4290944 ~ 4291549 (+)
AMCG00014213 anos1,LOC104963477 coding downstream 71690 4723654 ~ 4746002 (+)
AMCG00014214 NA coding downstream 185759 4837723 ~ 4851433 (+)
AMCG00014216 hdd1a coding downstream 299366 4951330 ~ 4958249 (+)
AMCG00014217 NA coding downstream 409868 5061832 ~ 5062272 (+)
AMCG00014218 NA coding downstream 427545 5079509 ~ 5079783 (+)
G68473 NA non-coding upstream 987 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 60772 4584474 ~ 4588428 (+)
G68422 NA non-coding upstream 99198 4500864 ~ 4550002 (+)
G68376 trappc2 non-coding upstream 353381 4294817 ~ 4295819 (+)
G68374 NA non-coding upstream 355674 4293326 ~ 4293526 (+)
G68497 NA non-coding downstream 133362 4785326 ~ 4785601 (+)
G68509 NA non-coding downstream 205065 4857029 ~ 4857230 (+)
G68538 NA non-coding downstream 799324 5451288 ~ 5451521 (+)
G68559 NA non-coding downstream 1005286 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 1127414 5779378 ~ 5782386 (+)
AMCG00014196 NA other upstream 517482 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 1938871 2706840 ~ 2710329 (+)
G67896 NA other upstream 2519055 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2746513 1900220 ~ 1902687 (+)
G67801 NA other upstream 2768159 1879091 ~ 1881041 (+)
G68830 NA other downstream 2694231 7346195 ~ 7349467 (+)
G68848 NA other downstream 2761676 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 2812539 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5351094 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 5496015 10147979 ~ 10151913 (+)

Expression


Co-expression Network