G68497


Basic Information

Item Value
gene id G68497
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4785326 ~ 4785601 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85589
ctcacgtgcccattgtaggcgctttggcagtggacaggggtcagcatgggcaccctgactggtctgcggctatgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcgctccccacgtgcatcagtgagccttggccgcccatgaccctgtcgccggttcactgcttttccttccttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85589 True 276 lncRNA 0.57 1 4785326 4785601

Neighbor

gene id symbol gene type direction distance location
AMCG00014213 anos1,LOC104963477 coding upstream 39324 4723654 ~ 4746002 (+)
AMCG00014208 NA coding upstream 202117 4568669 ~ 4583209 (+)
AMCG00014209 NA coding upstream 236919 4520802 ~ 4548407 (+)
AMCG00014207 LOC108443135,LOC102799111 coding upstream 286370 4460775 ~ 4498956 (+)
AMCG00014202 NA coding upstream 468647 4298341 ~ 4316679 (+)
AMCG00014214 NA coding downstream 52122 4837723 ~ 4851433 (+)
AMCG00014216 hdd1a coding downstream 165729 4951330 ~ 4958249 (+)
AMCG00014217 NA coding downstream 276231 5061832 ~ 5062272 (+)
AMCG00014218 NA coding downstream 293908 5079509 ~ 5079783 (+)
AMCG00014220 nlgn4,nlgn4x coding downstream 329049 5114650 ~ 5118152 (+)
G68473 NA non-coding upstream 137113 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 196898 4584474 ~ 4588428 (+)
G68422 NA non-coding upstream 235324 4500864 ~ 4550002 (+)
G68376 trappc2 non-coding upstream 489507 4294817 ~ 4295819 (+)
G68374 NA non-coding upstream 491800 4293326 ~ 4293526 (+)
G68509 NA non-coding downstream 71428 4857029 ~ 4857230 (+)
G68538 NA non-coding downstream 665687 5451288 ~ 5451521 (+)
G68559 NA non-coding downstream 871649 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 993777 5779378 ~ 5782386 (+)
G68623 NA non-coding downstream 1111469 5897070 ~ 5956185 (+)
G68475 NA other upstream 133362 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 653608 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 2074997 2706840 ~ 2710329 (+)
G67896 NA other upstream 2655181 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2882639 1900220 ~ 1902687 (+)
G68830 NA other downstream 2560594 7346195 ~ 7349467 (+)
G68848 NA other downstream 2628039 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 2678902 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5217457 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 5362378 10147979 ~ 10151913 (+)

Expression


Co-expression Network