Gene
RNA
| Item | Value |
|---|---|
| gene id | G68559 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 5657250 ~ 5704009 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU85659 | True | 891 | lncRNA | 0.38 | 2 | 5657250 | 5704009 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014223 | NA | coding | upstream | 13761 | 5607773 ~ 5643489 (+) |
| AMCG00014222 | NA | coding | upstream | 49496 | 5595455 ~ 5607754 (+) |
| AMCG00014221 | prkx | coding | upstream | 107152 | 5508024 ~ 5550098 (+) |
| AMCG00014219 | NA | coding | upstream | 526605 | 5129171 ~ 5130645 (+) |
| AMCG00014220 | nlgn4,nlgn4x | coding | upstream | 539098 | 5114650 ~ 5118152 (+) |
| AMCG00014225 | NA | coding | downstream | 17888 | 5721897 ~ 5739921 (+) |
| AMCG00014224 | NA | coding | downstream | 51520 | 5755529 ~ 5774761 (+) |
| AMCG00014229 | sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 | coding | downstream | 162896 | 5866905 ~ 5879257 (+) |
| AMCG00014237 | NA | coding | downstream | 329428 | 6033437 ~ 6054435 (+) |
| AMCG00014243 | NA | coding | downstream | 530794 | 6234803 ~ 6239921 (+) |
| G68538 | NA | non-coding | upstream | 205729 | 5451288 ~ 5451521 (+) |
| G68509 | NA | non-coding | upstream | 800020 | 4857029 ~ 4857230 (+) |
| G68497 | NA | non-coding | upstream | 871649 | 4785326 ~ 4785601 (+) |
| G68473 | NA | non-coding | upstream | 1009037 | 4647710 ~ 4648213 (+) |
| G68434 | NA | non-coding | upstream | 1068822 | 4584474 ~ 4588428 (+) |
| G68589 | NA | non-coding | downstream | 75369 | 5779378 ~ 5782386 (+) |
| G68623 | NA | non-coding | downstream | 193061 | 5897070 ~ 5956185 (+) |
| G68635 | NA | non-coding | downstream | 308673 | 6012682 ~ 6013059 (+) |
| G68637 | NA | non-coding | downstream | 350526 | 6054535 ~ 6056347 (+) |
| G68649 | NA | non-coding | downstream | 369708 | 6073717 ~ 6110306 (+) |
| G68475 | NA | other | upstream | 1005286 | 4649200 ~ 4651964 (+) |
| AMCG00014196 | NA | other | upstream | 1525532 | 4127476 ~ 4131718 (+) |
| AMCG00014146 | NA | other | upstream | 2946921 | 2706840 ~ 2710329 (+) |
| G67896 | NA | other | upstream | 3527105 | 2126872 ~ 2130145 (+) |
| AMCG00014111 | NA | other | upstream | 3754563 | 1900220 ~ 1902687 (+) |
| G68830 | NA | other | downstream | 1642186 | 7346195 ~ 7349467 (+) |
| G68848 | NA | other | downstream | 1709631 | 7413640 ~ 7416594 (+) |
| AMCG00014272 | tbc1d23 | other | downstream | 1760494 | 7464503 ~ 7482560 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | downstream | 4299049 | 10003058 ~ 10008648 (+) |
| AMCG00014345 | NA | other | downstream | 4443970 | 10147979 ~ 10151913 (+) |
