G68757


Basic Information

Item Value
gene id G68757
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 6990603 ~ 6990867 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU85931
aacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacatttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaac

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU85931 True 265 lncRNA 0.47 1 6990603 6990867

Neighbor

gene id symbol gene type direction distance location
AMCG00014258 epha3 coding downstream 102513 6887026 ~ 6888090 (-)
AMCG00014257 epha3,LOC107549902,LOC107676997 coding downstream 130061 6814181 ~ 6860542 (-)
AMCG00014256 NA coding downstream 234970 6752859 ~ 6755633 (-)
AMCG00014254 arl13b coding downstream 251336 6718319 ~ 6739267 (-)
AMCG00014255 NA coding downstream 272671 6710219 ~ 6717932 (-)
AMCG00014263 NA coding upstream 49864 7040731 ~ 7042716 (-)
AMCG00014264 NA coding upstream 70854 7061721 ~ 7061978 (-)
AMCG00014262 NA coding upstream 71195 7062062 ~ 7070724 (-)
AMCG00014265 NA coding upstream 86172 7077039 ~ 7093313 (-)
AMCG00014268 chmp2b,LOC108435168 coding upstream 249417 7240284 ~ 7254356 (-)
G68724 NA non-coding downstream 310315 6680025 ~ 6680288 (-)
G68722 NA non-coding downstream 455902 6534480 ~ 6534701 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding downstream 934272 6054111 ~ 6056331 (-)
G68595 NA non-coding downstream 1164674 5825504 ~ 5825929 (-)
G68590 NA non-coding downstream 1208211 5779485 ~ 5782392 (-)
G68767 NA non-coding upstream 53258 7044125 ~ 7045812 (-)
G68773 glrx,LOC100698576,LOC103359009,LOC108424411,LOC103461279 non-coding upstream 63064 7053931 ~ 7054306 (-)
G68774 NA non-coding upstream 63910 7054777 ~ 7058319 (-)
G68826 NA non-coding upstream 297196 7288063 ~ 7288335 (-)
G68827 NA non-coding upstream 298069 7288936 ~ 7289437 (-)
AMCG00014241 NA other downstream 882245 6059489 ~ 6108358 (-)
AMCG00014228 NA other downstream 1312104 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 3595849 3385757 ~ 3394754 (-)
G68088 NA other downstream 4161459 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 4337356 2641059 ~ 2653247 (-)
AMCG00014271 NA other upstream 387221 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 411285 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 422862 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 1144036 8134903 ~ 8139126 (-)
AMCG00014298 NA other upstream 1165065 8155932 ~ 8158590 (-)

Expression


Co-expression Network