G68830


Basic Information

Item Value
gene id G68830
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7346195 ~ 7349467 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86015
tttgaataaaaataactctTTATTAACATActaataaatacagaacaaaagtagccttttttaaggttttttgCAATGCCTGCTCTTTAAAGGGCTCCTCCTCACTGGCTTCCGCTCTCAAGTACGTAATCGAAACCATCATTGAGTTACGGATTTTGCACATTGAATTGCTTGGCTTTACAAACACTTATACGCACTCCTCTGGAACGCAGTAAACCTCAGCCTCACCGAGGAGGAGAGATGACTGCACAGGAGCCTCGGATGAATCCCTGGCAGGGACACAGCACTATCCTCTGTAATGGTCTTCatttcaatgcttttttttttccgctTCTCCTCCATGACACTGCCAACTAATTTTCATATACATGGTACACCACCGTGAGCCATAAAAGCAAGttcaaatgcagaaaaatacatatattaaattaaataaaatgcccaCACCtcacaaacattacattaatcatGATTTCAGATAGATTGACAGATATATTTTGACACTACAGCAGGTGGGCGTAGCGCGAGTCTTGCTCTGCCTCACGTGTGTCCCATTGTGGAGGACGCCAGGCGGTGTCAcgatataaatatacagacataAACATCCAAAACACTTCAGAATCAACCTATTTTATTACCTTTCTTgagttttttaaaacataaatatattctttCTGCATATGTAAAGTTAAGTAACAATCTGCAAGGTCTAATTTAGAAACGGAAGCCAATGTCCACAATGTCCAGGCCCTCCATCAGTCCCCAGTGTCCCCAGAGTCCCCAAGCTGGAGAGGAGTGTTGAGTGAACAGGTCCAAATTACAGATGCTCTTGCCCCCATCGGTCCTTTCACATTGGATCAGCCCAGGTGCCTTTAAAGAATAAATTAAGCTGCCCTTGAGTTACAGTCCAAACAGGCTCCAGTGTTTGAAGAGCAGTGTCCGGTTCCAGTCCTCAGCCTTGGGCCCAGTCCAGCGCTGGGACACTGGCGCACCGAGCAGGACAGTCCCGAGGTCAGTGTGCATGTCCAACACCGCAGAACAGacagagaatgtgtgtgtgtgtgtgtgtttgggtgggGGAGGCAGGATACATCCATGGGTCTGAAAGGCAGTGTGAGGCTCTCCCCCCTGATCTCTCAATCTCTGAAGAGCAAGAGAATCTCAGAATCGAGGAGAGGATTCAAGCACGGCAGCCGACTGCCTCCTAACGTCCCCCCCTGGGACTGGGAAACCCtgccacccccccaaccccagccCCCCGCGCTCTCTCTGGGAGTCCTAGATGGGGATGGAGACAATGGTGGGCAGCTTCCCGATCGGCGGGGGGTTGTACTTCTCCACTCTCATGAGCCGGCGCAGGATGTCGTCACGGTCCTTGGGCCAGCTATACACGTGTGTGTTCTGCAGCCAGGTGGGCACGTGGCACTTTTTTGGCCCCAGGGAACAGAATCGGGATGAAGCGGAAATTCTTGCTGCCGTTCTGGATGAACTCATTCTGCAGCTGCGGGGAGAAGGAAAGGAGACTCAGTGCGCTCCTCACTACAGAGACAGCCCCCAGCAATCACTTCACATTCATCAAAGCATTTTCTAGGACTTAAAACACTGCACAGAAATAACCCTCAAGGAGTAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86015 True 1633 TUCP 0.48 2 7346195 7349467

Neighbor

gene id symbol gene type direction distance location
AMCG00014266 NA coding upstream 60960 7278122 ~ 7285235 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding upstream 108633 7229073 ~ 7237562 (+)
AMCG00014261 NA coding upstream 272593 7073324 ~ 7073602 (+)
AMCG00014260 LOC107688668 coding upstream 291288 7050336 ~ 7054907 (+)
AMCG00014259 NA coding upstream 299320 7039754 ~ 7046875 (+)
AMCG00014273 tomm70 coding downstream 95549 7445016 ~ 7455956 (+)
AMCG00014274 nit2 coding downstream 134595 7484062 ~ 7489351 (+)
AMCG00014281 lancl3 coding downstream 288354 7637821 ~ 7642535 (+)
AMCG00014282 xk coding downstream 295951 7645418 ~ 7653546 (+)
AMCG00014283 NA coding downstream 310001 7659468 ~ 7664529 (+)
G68771 NA non-coding upstream 287876 7056707 ~ 7058319 (+)
G68738 NA non-coding upstream 602084 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 631374 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 1099146 6244902 ~ 6247049 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 1139619 6204178 ~ 6206576 (+)
G68904 NA non-coding downstream 276521 7625988 ~ 7626404 (+)
G68982 NA non-coding downstream 525060 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 665277 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 783821 8133288 ~ 8136210 (+)
G69206 NA non-coding downstream 1384856 8734323 ~ 8735939 (+)
G68475 NA other upstream 2694231 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 3214477 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 4635866 2706840 ~ 2710329 (+)
G67896 NA other upstream 5216050 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 5443508 1900220 ~ 1902687 (+)
G68848 NA other downstream 64173 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 115036 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 2653591 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 2798512 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 5896842 13246309 ~ 13251732 (+)

Expression


Co-expression Network