G68848


Basic Information

Item Value
gene id G68848
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7413640 ~ 7416594 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86046
acacacacacacacacacacacacacaatcacaaccTAGCAAGAACACACACAACCAGGTACATAAGAGCTTCCTTAAGAGTTTATTTAAgctcagtaaaacaaaacaaaaacactgtagtTTGATTCAAGTTTCCACACAATTGCACACTGTGAACAGAACCTCGGTCTCAACCCCCGTGCAGAGGGAATAAACACGGAAAGCACGGAGCAGAGAGATGGAGGCCAGGCTGGCGCCGCGCGGGTGATGGAGCGGGAAGAGACTTAGTAGGGACTTACTACTGGTTTACTTCACAGGATTCCCTTTGTACCccaattcaataataataataataataataataataataataatacctgaAATAAGTTAATTTACTTCCCTTTGGATCATTTCCTACTCCGCGTCTCGGAGGACAGTCTGGCTGCGAGACACCTGGGACTGAAACACACATTTCGcttcacacagagacaaagTCAAGACACACAGTTTGCAGTACCACTTTATCGCCAGACTGGGGCTGTACCTGGATTGTGTTTGacatgtttgtgtctctcttctGTTCAAACTCACCCCTGTCTATTGGCCAGTGCACAACTCAACATTATAAAAGTAGAATTCCACCGATTATAACTGGCAGAGATAACAAGatatgttttctgttaaataaatctCTACTTCTTGATCCTTAgctataaacattaaatatacagttcagaaaagaaaaaacaaagagaaaaatatatatattttcttatttaaaaaatcttccCTTTCGTTGTCACCATTTTCAAGCTTCgatttttctttctgtacagAATAATTCAAAGTAACggattcctttaaaaagaaaCGCTAGAGAACGCTGGATCTGCCCATGTCCACAGAGCCTTGATCATTCGGATCAAGCGTTTCGACTGGCGGCCGCTTCAACTGGGCCTTTGAGAGTGAAGGCAGGAGACGCCGTAGCCGTTCAGGTCCAGGACAGATCACTTCCACACTGCAGTGCAGAACCGTGTCCCAGCTGACGCACTTCATTCTGGCAGTGTTGTGTGAGGCTGTAGTTTGGTTATTTTTTGGTTGAGACACATATGAGGTGAGAATAATGCCGCAGTGATGTTACCCCCCCGAGCACACATCGCTGTGCAGTGCAATGTCATCTGTGCTTCAGATCCACTCTGCAGTACAGAcgctttctgtttgtttgtttgttttgttcattacaGTGCACGTCCTGTAGACCGACAGGGAGCCTCTATCTTGTGCTTCTGTGTGTGGTCTGTCAGAGCGGGAGGGCGGCTGTGCAGCGGGAGAGGCTTTAATAAGAGTAGGGACAGCTACTCTACCTTTACTGACTATACATACAGGGGGGATCCACAGCAAAAGGTCCCACTTGGCCAGCCCTCCTGGGGGGTACAGCACGAATCcgatctggagagagagagagtagggcACCGTCAGCAGCTCCACCACAACGCAGCTCCGCAAGAGCCCTCTtggcaaacacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86046 True 1510 TUCP 0.45 2 7413640 7416594

Neighbor

gene id symbol gene type direction distance location
AMCG00014266 NA coding upstream 128405 7278122 ~ 7285235 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding upstream 176078 7229073 ~ 7237562 (+)
AMCG00014261 NA coding upstream 340038 7073324 ~ 7073602 (+)
AMCG00014260 LOC107688668 coding upstream 358733 7050336 ~ 7054907 (+)
AMCG00014259 NA coding upstream 366765 7039754 ~ 7046875 (+)
AMCG00014273 tomm70 coding downstream 28422 7445016 ~ 7455956 (+)
AMCG00014274 nit2 coding downstream 67468 7484062 ~ 7489351 (+)
AMCG00014281 lancl3 coding downstream 221227 7637821 ~ 7642535 (+)
AMCG00014282 xk coding downstream 228824 7645418 ~ 7653546 (+)
AMCG00014283 NA coding downstream 242874 7659468 ~ 7664529 (+)
G68771 NA non-coding upstream 355321 7056707 ~ 7058319 (+)
G68738 NA non-coding upstream 669529 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 698819 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 1166591 6244902 ~ 6247049 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 1207064 6204178 ~ 6206576 (+)
G68904 NA non-coding downstream 209394 7625988 ~ 7626404 (+)
G68982 NA non-coding downstream 457933 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 598150 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 716694 8133288 ~ 8136210 (+)
G69206 NA non-coding downstream 1317729 8734323 ~ 8735939 (+)
G68830 NA other upstream 64173 7346195 ~ 7349467 (+)
G68475 NA other upstream 2761676 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 3281922 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 4703311 2706840 ~ 2710329 (+)
G67896 NA other upstream 5283495 2126872 ~ 2130145 (+)
AMCG00014272 tbc1d23 other downstream 47909 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 2586464 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 2731385 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 5829715 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 6238644 13655238 ~ 13689188 (+)

Expression


Co-expression Network