G69156 (LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925)


Basic Information

Item Value
gene id G69156
gene name LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8383285 ~ 8384224 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU86412
CTCATATTGGGATTGGCTGGTGACTTGGCCACCTGTCTGCCCGTCTGCAGGTGGCTGATATGCTGCTGGAGCTGTGCGTGACCGAGCTGGAGGACGTTGCCACAGACTCCCAGAGCGGCCGCCTGTCCTCCCAGCCCGTCGTGGTGGAGAGCAGCCACCCCTACACCGACGACACGTCCACCAGCGGCACTGTGAAGATACCAGGTGCCGAGGGGCTGAGAGTGGAGTTCGATCGGCAGTGCTCCACAGAGAGGCGCCACGATCCTCTCACCATCATGGACGGCGCCAACCGGATCGTGTCCGTCAGATCAGGGCGGGAGTGGTCCGATTGGTCGAGTGAGCTGCGCATCCCGGGAGACGAACTGAAGTGGAAGTTCACCAGCGACGGCTCGGTCAATGGCTGGGGCTGGCGCTTCACTGTCTACCCCATCATGCCAGCTGCAGGTACTGCCTCACTGCACCCTCTGGAAATGCAGCTGACCCGTAGAAACCACACGTTACATAcagcgatcagccataacattat

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase HERC2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86412 True 526 TUCP 0.61 3 8383285 8384224

Neighbor

gene id symbol gene type direction distance location
AMCG00014304 NA coding downstream 48833 8330056 ~ 8334452 (-)
AMCG00014305 nipa2 coding downstream 56865 8322434 ~ 8326420 (-)
AMCG00014303 NA coding downstream 78104 8304531 ~ 8305181 (-)
AMCG00014302 LOC107582727 coding downstream 122305 8259727 ~ 8260980 (-)
AMCG00014301 rp2,LOC107753404,LOC107711097,LOC107685300 coding downstream 185660 8189023 ~ 8197625 (-)
AMCG00014312 NA coding upstream 152713 8536937 ~ 8539049 (-)
AMCG00014310 gabrg3,LOC107711006 coding upstream 216938 8601162 ~ 8615001 (-)
AMCG00014311 NA coding upstream 347354 8731578 ~ 8758181 (-)
AMCG00014317 cnga3a,LOC108441138 coding upstream 645881 9030105 ~ 9040045 (-)
AMCG00014319 NA coding upstream 663080 9047304 ~ 9050642 (-)
G69086 NA non-coding downstream 132724 8226494 ~ 8250561 (-)
G68981 NA non-coding downstream 508927 7874153 ~ 7874358 (-)
G68905 NA non-coding downstream 756910 7625985 ~ 7626375 (-)
G68875 NA non-coding downstream 917623 7465409 ~ 7465662 (-)
G68874 NA non-coding downstream 923396 7455978 ~ 7459889 (-)
G69233 NA non-coding upstream 506332 8890556 ~ 8890839 (-)
G69250 NA non-coding upstream 614202 8998426 ~ 8998626 (-)
G69352 dcaf6 non-coding upstream 965564 9349788 ~ 9355238 (-)
G69372 NA non-coding upstream 1205600 9589824 ~ 9590081 (-)
G69373 NA non-coding upstream 1206952 9591176 ~ 9591381 (-)
AMCG00014298 NA other downstream 224695 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 244159 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 959994 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 971395 7402152 ~ 7411890 (-)
AMCG00014271 NA other downstream 996301 7378088 ~ 7386984 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 921015 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 1616910 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 1673873 10058097 ~ 10061230 (-)
G69537 NA other upstream 2412492 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 2740805 11125029 ~ 11137086 (-)

Expression


Co-expression Network