G70221


Basic Information

Item Value
gene id G70221
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14167446 ~ 14171012 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU87727
tagaataaaaacatgtttttattattacaaatagaTTTTAACACTGCACTTTTATTCTGAAAATGGCTTTGTGCTTAGTTACTTTATTCTTCTACATACAGTTACaaaccaattttattttatgaaataaggcacttcacatacattttgttaaggAATAAAATGCAGTTAATACATACTGTTGCTGGGTTTTACACATCAAAGGGGTAAACACTAGCCACCCAGTCAGCATTATATTACACTAACAAGCcttgtttgaaaataaagttCTCAAATTGAATCacacttaattatttttctgttggtttgtctcagatttccttttaaaaagaaaaaagaaaagtcaagcTGGGCCAATCAACCATGCAGACAAATCTAACATAATACACAGTGATGACTACTGACTTTGCAATTTGCTTGCAATCATTTTGGAATCAAAGGTAAAATACCTTTTAATCAAACTGAGGTATTGAGCATGAACAAGGATTAAATCTGTACAAAACCAATACCAATTACTGAACACAATTACGTCAATTGTACCACAAAAATGTGGGAGGTCAGTTACATTGAGCCACCTTGGTCACATTACAGATGCATATGTCTGCTACAATGATCCACTTAACAAgagaacaaaatacatgaaatacatgTCATTGTGATTCACTTCTTCGTAATCTTATTTTCAAAAGGATAGTCACATTATTCAGAATGTGGGAATATGGCGTTGATTAACATCTTTATGAGCAGCTTGAAACACAAGCTACTTATAAACAAACATTGGCAAAGAATGTGGATCACAGAAGTATAATTATCTGCGCTGTTTAGtgctattaaatatttaacagttgGACATTCAAGCCACACAATTGGTCACAAACCAATAAAATACTTCACACCAATtgttaatgtgtaaaaagcaaactttgatttagatataaatataaattggtGATAATCAATACCCAgtgatttaatttctgtttagttttttaaagcagCAACTGTTGATGTTAAATCAATGTTTcactataatatacatttctttttaccaactacaataataatgagCATAAAGACCATTCAttagcaaatgcaaacaaagacCAGTAATCAAAACTGGCCGAGGTACACCTGGGACAGGGATTACATCCTACACCTGTAAAGCGAGGGGACATCAGTTCAAAGTTTTCATATCCttaattcaaaacaatgtaATCTGGTGATTATATAAGTATTGTTCACTGTACTATAATTAGTTATAAATGTTCAGAGTAAGCAGAATACTGATTCGGTCTAGGCTGTAAAGACTTTGTTTGATTGCACAGAAGTAAGACTGTGACAGGAACTTCCCTAAGTTTCCTGCTGCACATATGCCCCACTCTCtcattcacacttttttttttttaaagtaaaaccaTTAAGGCTTCATTCATGACAATAAATACTAGTAATATATTcaatgagaaaaaaactaaaacaacagcaaacaaatacacaaaaaaacctccttaattgtgaaatgcagtgccttcaaaaataaacattacatttgaactTAATCACCTAAAATAACAATTCAACCATGTATGTATGACTGTTCCTTTTAATCACCATGACTACATACCTCTTCCTTTAATTAGAACATATTGCTATGCTGTTTCTACTGTCACCTGAGATGTAAAGATGAGCTGGAAGTAAGGCCTGAGCGCATATTCACTTCCAACATCCGCAGTGCTTTACAATTTATATCAAACTTTGAAAATAACTCAATATGTGTGTAGGCCATGCTTAGCTTTTCTCTGAAATTCCTTTTGTCTGAAATCTCCATTTCATTGTGAAACCAGAGTACTGGTAGAAACCAGGAAGttctttctgaaatataatttttcaCAAATTCCAGGGGTGAAAGgattacaaaaagtaaaaaagctTGTATTTAAGTATGAACTGTACATAAAGCTAAATATACCTATGCTTAAATGCATCTTGATATGTTTGTTGTGCACTGTAGAACATGGCATCACTATCgatttgtattctttaaattACTGAGCCTTTTCAGTCTCTGACCTATACTTCCAATATAATGCTGTGAAACTTCAACTTCAATGTTCAGATAAATATACTGATGAGTCATGAAATACCCATAGGATGTAGATAATGTGCTTGTAAAAAtcatagcaataataatatcacaGCAATAGCGTTGCTTTTTAAGAGCAGAAGAGATCACCAGTCCCTGTTGttgaaactaaatattttttttaaattgactttttaGAGGTTTAGGAATTCTGTGCTTTGTAGGGAAGTTAGGAAAATCAAATCCGACTCCGTGTTACTTTACATGACCTATGATGACACCGGGGCCCGAACAGGCTGTCATGATCTCGTCATACTGGGGGGgcgggtctgtgtgaatgtctCCAGCCTCGATCCTCACATCCGTGTGTCCCATGGCTTCTTCATACGAGGGAGGAGGGTCCCCATTGGACAGCCTGCCCGGGGTCAAGTCTGAGCCCACGTAGGCCGAGAAGCCCCCCGTCACCCCACTGTTGGTGCTGAGGTCTGACTGGGGGGAGATGTCAGGGTGGTAGGAGCTGTGGCCTCGCTGGTCCATACCCACCAGGGACAGGTGCCTGTCCCGCCGGCCTGCCGCCTCCCGTCTCTGGCTGAAAGTGGACCCCCTCTGGAAGAGCTTGCGGGAGTGGCACCTCCAGAGAGCCACCAGCACGATGATAATGAGCAGCAGGCCGGCCAGCAGCGGCACAATCAGGTAGACCGAGTGGAACAGGCTGCCTCCCATCTCTATCCCGCTGCCAGAGTTACTCTCCCTGACATACTCCTCCCAAAACCTCTTctgtggtaaaaaaacaaaaaacaaacatcacgttaaaatacatatattcaaaatgcaaaatgtgaagATTCCTTAACTGTCTGAGGAAGACAACCTTCACCGATCGAGTCAAGACTGAAACTATAAATGAT

Function

GO: NA

KEGG:

id description
ko04213 Longevity regulating pathway - multiple species

RNA

RNA id representative length rna type GC content exon number start site end site
TU87727 True 2991 lncRNA 0.37 2 14167446 14171012

Neighbor

gene id symbol gene type direction distance location
AMCG00014447 NA coding upstream 4124 14162125 ~ 14163322 (+)
AMCG00014446 NA coding upstream 6604 14160636 ~ 14160842 (+)
AMCG00014445 cpox,LOC107717573,LOC107585846,LOC107657924,LOC107550392 coding upstream 9720 14151299 ~ 14157726 (+)
AMCG00014443 NA coding upstream 24373 14138406 ~ 14143073 (+)
AMCG00014444 tpp2,LOC107665822 coding upstream 61952 14085512 ~ 14105494 (+)
AMCG00014458 NA coding downstream 52504 14223516 ~ 14235412 (+)
AMCG00014460 NA coding downstream 66999 14238011 ~ 14241495 (+)
AMCG00014459 NA coding downstream 200133 14371145 ~ 14380019 (+)
AMCG00014457 tmem47 coding downstream 281514 14452526 ~ 14462108 (+)
AMCG00014462 dmd,LOC106574978 coding downstream 513721 14684733 ~ 14692283 (+)
G70054 NA non-coding upstream 470575 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 787042 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 832261 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 1185012 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 1567133 12600104 ~ 12600313 (+)
G70271 NA non-coding downstream 295692 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1008833 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1179630 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 1279766 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 1329546 15500558 ~ 15500832 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 478258 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 915714 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 4015533 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 4158798 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 6684886 7464503 ~ 7482560 (+)
AMCG00014456 NA other downstream 18552 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 131435 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1050902 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 1504619 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 1958467 16129479 ~ 16139032 (+)

Expression


Co-expression Network