G70286


Basic Information

Item Value
gene id G70286
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15179845 ~ 15180820 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU87814
GTCcagtgcaaaattaaaatagtatatatatcaaaaacaaataagatattGAGTTTCAgataaataatggtaaatatcCCACAGTTTCAGTCCATCACAGTTAAGTCTCaatagaattgtatttatttattgatcttaAACTTAGCATTGaatcattttttaacatttatccAGAATACCATACtttaattgattcattgatCTCCAACCCAGGGCTGTAGATGTGTTTAAGTTGATGAAAGTAAAACTTAATGCAACAGAACAGCCAGGTCGATCGATTTGAAATCTATTTTGAAGGCCTCCAGCTTTTTCTCAACCCTATGTTTTAATTATCTGAATGCAATTTATTAACACTGGTATGTGGTTtcttgattaaattaaaacagtatattattatCTCATGAAATGTTTACAGTCTGTGCTGTGGATGTTTctacagcaaagaaaaaagtaagTGCACTTGGGTTACACATACTTGAAGTATCACAGGTTATAGTTCAGACCCtttcatgtaaaaaataaatatatatatacacacaattctGTGGTAGGATGTTAGCTATCCAAAACCAATGTAAAGTCACTGTACtagtgtgtgtgatttattggTGAAAATGCAGCTTAAAGGTTTGGAACCCTGTGTTGTTTGAGAGATCTACATTGTCTTCTGAATGCAGGGAATGTTTAGCATATGCTTCTGCTACAGTGCAACACCCAGACATGTCTCAGAAACCACAGTTGCTGGTTGAATGAAAGCTACAAAAAAATCCACTTTTTGAAAGTGATGTACAAAACTATAAATGTTAGGAAAActattggattttttttgttttagcaaaAGGTAGAAAACTGCAAAACCAGACAATCTTCTCGCTCGGTATCCCCAATCTCTGTCGGGTGGGGTCCAGCCACAGGAGTTTCTTCTCTTCATTCCCAGCCCATGATCACTTTACTGAAGCTGACAAACACGCCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87814 True 976 lncRNA 0.35 1 15179845 15180820

Neighbor

gene id symbol gene type direction distance location
AMCG00014468 NA coding upstream 690 15164212 ~ 15179155 (+)
AMCG00014469 dmd,LOC106574979,LOC107692624,LOC107665951 coding upstream 42309 15089695 ~ 15137536 (+)
AMCG00014464 NA coding upstream 136390 15022999 ~ 15043455 (+)
AMCG00014467 NA coding upstream 190778 14920413 ~ 14989067 (+)
AMCG00014466 NA coding upstream 351724 14823792 ~ 14828121 (+)
AMCG00014471 NA coding downstream 66951 15247771 ~ 15253971 (+)
AMCG00014472 wdfy2,LOC106582235 coding downstream 92741 15273561 ~ 15287276 (+)
AMCG00014476 NA coding downstream 152109 15332929 ~ 15336221 (+)
AMCG00014480 med4 coding downstream 184876 15365696 ~ 15371378 (+)
AMCG00014486 NA coding downstream 298632 15479452 ~ 15485053 (+)
G70271 NA non-coding upstream 712101 14466704 ~ 14467744 (+)
G70221 NA non-coding upstream 1008833 14167446 ~ 14171012 (+)
G70054 NA non-coding upstream 1482974 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 1799441 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 1844660 13334214 ~ 13335185 (+)
G70378 itm2b,LOC108430053 non-coding downstream 169822 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 269958 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 319738 15500558 ~ 15500832 (+)
G70415 NA non-coding downstream 324994 15505814 ~ 15506048 (+)
G70418 NA non-coding downstream 341705 15522525 ~ 15525015 (+)
AMCG00014461 NA other upstream 822977 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 974831 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 1490657 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 1928113 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 5027932 10147979 ~ 10151913 (+)
AMCG00014470 NA other downstream 41094 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 494811 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 948659 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 1284801 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 2183978 17364798 ~ 17487050 (+)

Expression


Co-expression Network