G70689


Basic Information

Item Value
gene id G70689
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16366124 ~ 16369464 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88331
AATTTGGAGACGAGTCgccctttaaaataacaaatgcaaattCCTGGTTGCGTGCCGAGAGACCAGCGGCAGGTCACGGTACACTGCCGACAGACACTGTAAACTGTGTCATGAAGCCATTTTGATAGAGGGTGACGCGCCTGGTCTTCACCTGTGTGTGAATATGAGGGAGAAATCGGGAAGTCACAGGGCTACACTTGCCTATGTCTTTGTTGTTGCTGGCCTCGTACGGTTCGTTGGCTCCCGGCAGGGACTTCAGCTTGGCACTCAACCGCTCTCCCTTGGCACTGGTGCCATGGCTGCTGTGCCCACTGTCTGAGAGACAATGACGACAAGAGATCAAGGTTTCAACagATCCCTGGAGTCTACATTTAATCCTCCCTGGTTCCACAATGCACAGTGTACATACCTCTGACCTGCTCCAGGACAGGGCTGTGTCTACTCTCAGGAAAGACTGCAGACAGAGCAGCAGAAAACAGAGCAAAGGAAGAAGGGATCACAGAAGAGGGCACTTTCATTTCAAGCAGAATGCATTCCTATCCTTGCGTTTTAGAAAGAcactttcagaaataaatgttagAGCTGGCAGCATGCTGGGATTTCTAGAACTAGATTTTCCATTAAGTGATGGCTGAAAATCAAGGGTTGTTAAAGTGAATCATGGGCCACATTATACATTAAACTGGGTATGCATGGATGAGGAAAGAAACATCTGGAAGGAGAAtggggaaacaaattaaaacagagacacagtgaTATTGTTAGTAAACGCAAAGCAAATCTGTATAATATACAGGGTTTCGGAGAGCTCCAAGAAAATGACCGTTTCCAAATGAGAAAACGGTATATGGGCCAAAAAAGGCCCTTACAAGCTGAAGCTGAACGTGGTTATGCCAAGGTGTTGTATAACCTTAGATTTCTACGCCAATCTTTTGTTAGCCTTGCTAGCTGCCTTGGATGTTAGTCTATTCCCATAGGGTTTAATCTCAACCTATAGTCACTCAGTAATCCTTTTGTTAGCACAGAACTGTCCGATTTTTTTCTCGTGGGCCAGTAATCCTGTTGCCACAATCGTGTCATGCTGCCATTTCTGAATAACCATTCTACCTCAATGACTGATTAGGAATGTGCAATATATAAAATTCTGGCACAATTGTAACTTTTTAATTAAGGGATCCTTGATATATAATTTTGTCTGAAAAtcacaatgtatgtattaatccTTAATGAGGCT

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88331 True 1234 lncRNA 0.44 2 16366124 16369464

Neighbor

gene id symbol gene type direction distance location
AMCG00014519 NA coding downstream 19769 16316534 ~ 16346355 (-)
AMCG00014520 NA coding downstream 57318 16308288 ~ 16308806 (-)
AMCG00014521 LOC106575534,LOC106575594 coding downstream 58651 16300633 ~ 16307473 (-)
AMCG00014515 pspc1,LOC108258933 coding downstream 115348 16231565 ~ 16250776 (-)
AMCG00014509 NA coding downstream 202004 16155258 ~ 16164120 (-)
AMCG00014518 NA coding upstream 5956 16375420 ~ 16376973 (-)
AMCG00014528 xpo4,LOC106582068 coding upstream 11430 16380894 ~ 16409288 (-)
AMCG00014527 LOC104951642 coding upstream 42272 16411736 ~ 16420491 (-)
AMCG00014530 NA coding upstream 55931 16425395 ~ 16431657 (-)
AMCG00014526 NA coding upstream 69831 16439295 ~ 16446968 (-)
G70679 NA non-coding downstream 84225 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 151997 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 662810 15700208 ~ 15703314 (-)
G70458 NA non-coding downstream 721210 15643619 ~ 15644914 (-)
G70420 NA non-coding downstream 841110 15522520 ~ 15525014 (-)
G70731 NA non-coding upstream 96315 16465779 ~ 16469228 (-)
G70876 NA non-coding upstream 914855 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 979972 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 1634346 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1959733 18329197 ~ 18331100 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3232373 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 4698587 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5229038 11125029 ~ 11137086 (-)
G69537 NA other downstream 5567977 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 6304894 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 352609 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 1077404 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 1219803 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 1621187 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2832339 19201803 ~ 19203567 (-)

Expression


Co-expression Network