G70846


Basic Information

Item Value
gene id G70846
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17132063 ~ 17173062 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88535
CggtggggtcttctgctgttgtagcccacccgcctcaaggttgtacgtgttgtggcttcacaaatgctttgctgcatacctcggttgtaacgagtggttatctcagtcaaagttgctcttctatcagcttgaatcagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttagaaatggacaC

Function

GO:

id name namespace
GO:0051402 neuron apoptotic process biological_process
GO:0043523 regulation of neuron apoptotic process biological_process
GO:0070997 neuron death biological_process
GO:1901214 regulation of neuron death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88535 True 513 lncRNA 0.46 2 17132063 17173062

Neighbor

gene id symbol gene type direction distance location
AMCG00014536 gdap2,LOC104943794,LOC104954255 coding upstream 366511 16737483 ~ 16765552 (+)
AMCG00014538 NA coding upstream 400194 16722198 ~ 16731869 (+)
AMCG00014537 NA coding upstream 412326 16692012 ~ 16719737 (+)
AMCG00014535 tbx15,LOC107712261,LOC107724509 coding upstream 520402 16583824 ~ 16611661 (+)
AMCG00014531 wars2,LOC106531917 coding upstream 553906 16557564 ~ 16578157 (+)
AMCG00014552 NA coding downstream 155851 17328913 ~ 17332815 (+)
AMCG00014560 NA coding downstream 606503 17779565 ~ 17780081 (+)
AMCG00014565 NA coding downstream 776498 17949560 ~ 18029896 (+)
AMCG00014564 NA coding downstream 865046 18038108 ~ 18067182 (+)
AMCG00014563 klf5,LOC107757638,LOC102777034 coding downstream 897472 18070534 ~ 18080340 (+)
G70835 NA non-coding upstream 34099 17028960 ~ 17097964 (+)
G70776 NA non-coding upstream 398426 16730878 ~ 16733637 (+)
G70735 NA non-coding upstream 640945 16490411 ~ 16491118 (+)
G70637 NA non-coding upstream 891725 16237110 ~ 16240338 (+)
G70562 NA non-coding upstream 1213442 15918413 ~ 15918621 (+)
G70865 NA non-coding downstream 77257 17250319 ~ 17253671 (+)
G70883 NA non-coding downstream 143191 17316253 ~ 17317556 (+)
G70897 NA non-coding downstream 176374 17349436 ~ 17350952 (+)
G70908 NA non-coding downstream 316764 17489826 ~ 17490607 (+)
G70938 LOC107575789,LOC100846954 non-coding downstream 477709 17650771 ~ 17651002 (+)
AMCG00014525 NA other upstream 662854 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 993031 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 1446164 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 1889730 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 2775195 14302447 ~ 14356868 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 191736 17364798 ~ 17487050 (+)
G71004 NA other downstream 1098792 18271854 ~ 18274360 (+)
G71525 NA other downstream 5682280 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 9731815 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 10662441 27835503 ~ 27841871 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G72552 NA non-coding CI01000012 null 6197021 ~ 6205504 (+)