G70865


Basic Information

Item Value
gene id G70865
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17250319 ~ 17253671 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88555
cattttaatgtgtgttaGAAGAGAAataaacgaaacaaaaaaaacattaaaactctGTGATCGTTAGAAATCTGATAATTCCCTGGATAATATATGAAATACAGTATCTTGACAAACATTCCTTTGTGCAAAACTAAAAATCTTAGTATCTTTACATACGAaacacaccaaaataaaataaaaacatcttacaAAGGTTTGACTGTAAtccttaaaaaacataataatgaacCTTTGGCTTTTCACTGTGTATTCATATTTGAGCAGTACATCGTATATCTCCATTGATTCAAAACATAGATCGATGAGTGTTTTCCCTTAAGTATTTCTTGGAATGCCTTTccatgtttacattttcagttgtacCACCACAGCCTTCCCGAGTGCAATATGCAGTTGTAAATTCTGATGCATCTGACGCCCGGATGGTTCCTTCTAGACTCATCTAATATTTGACCCAACAGCTgttaagaaacatttatttttgcaaagtgTGGCCAATATGATACTGGTCAATGTCACCTCCAACCCACATAAGAAGCAcataaccaaaacaaaccacTAACCGCTGCACTATTCTGTACGGAGAacactttgttaaaataataataataatggaatacACTTATTAATGCTTTGAgataattatattaaactatTAGAAGTAACTTCAATGGCCTTACACTCAATAACGTATCTTCATATGAACACACTTTGCAGTAGGCAGACACAAAAATGTCGAGACTTAAACTACAGTGAAATTTCCAAATGGTCATTCTTAAGGCAGACCACTGCTGATCGGAATCAGCAtctcttacaaaataaaagtatcattctgtcaaaatataaaattcaatCTTGAAGGAGATCAGTTTAAAGATGAGAACATCTATGAAGGTTATTGCCCTCTTTGTGAATATAGTCAAACAGTGCATGCCAAGTGAAATGAGGCTGTAGCCAGGGCAATGTGACATTCTTTCCCTCTGCTCCCTTACCATTCTGCACGTCTGTGCCAGACAACGTTAACACTGGCAGAATGCCATTCATAGATCTCTTCATGAATTTCTTCCCCAGGTGGTGGACTAGATtatgaaattactttaataacAGTACTGGGTAGAGTACGTATACAAAACTCTTCTCTTCACAGCCTCCGAGAGATCCGAGCAGCTTCCTCTGACCATGgtcttaaaaacttaaaaatgcagTGCCCCCAGTTAAAGCTTTCAAACATATTGGATTTGAATAGTATTATAAAAGTCATCTCTTTTTAAGAGGTATATATTTGCCAGTGGAACCTTCCTGAGTTCAGTGCAATTGTCAGTGACAGAAATTCCCTCGTTCAGACATTCTAAGAGTGGTTGggttacatatattttatttaatgaacatAAATTCTTTCTTTAATCCTGTTTTAAGGCAACAGTTAAAGGATATGGAGAAGACACTACTCCTTTGACTGTTGCCTTAAATagcgtacacacacacatagagagagagaggaaaaaaaaaaaaaaaaaaatcaatcccTGATGACCGATTGACTTAATTCTATTGGCTTGAGTTCTTTAGCTCTAAATGGCTTCTTGCCAGCAGTGTCTGAGCACGCAAAGCTTGAATCTCATCACATTCATCAGAAGGTAGCCAAAATAGACAATTGGTAGACAATTCCATTTCCATCCAGCCCCCTCTTTTCAATCCATTTCCATGGACATCAGACGGCGTTTGGACCTGGGGTCGTCCTCAACATCTTGCTTACAGCAGCAGCGGGCACTGATGAAGCCAATCAGCACTGACAGGAGGCCAACAGCAACTGCGGCACCAGCTCCATACAGCAGCGGCAACTTCATCGATTCCCACAGCAAACTTCACAACCAGGAAGACATTCTCTGAGGTGATGTCCTTTGACTTCTGCCAGGATCCATCGGAGGATTTCACCCAGGGAGTAACAGTGCAATAGTAATCCCCATAGTCGCTGTTCTGAGTCTTGTGAATGCTAAGGCGATACTTCTTTTCATCAATCCTCTCCAGGCTGCAGTCGCTGCTGCCATTTGGATGGGGCTTCTTCACCACACCCCAACGGTCCACCAAGGCCATGTTGTGCACACTGCCTTCCTTGTACCGAGTCTGGTCAAGAAACCATGCAACCTCGTAGGAGAAGTCATCTTGGAACAAAACAcaagtaattgaaaatgttgcttCTCGGAAGAGAAATGCAGAACACAGACAAGGCACCACATGCTAATGGTGAAAGATACTTTTTTagacaaaaaattaaattatttgcagaacgaattacatttagtttgacATAAAAGAGTCCATGCTTGAAAGGAAGAtctgaaataaacaatttatgGGAGaagatgagagaaaaaaaaaaaatggcaactGCGGAGAGTGTAGACTCCGAGAGAATCAATATAGGTCAGCTCAGTGTCACTAACATGAAATGCTCCTACATAGCTTACATCAGCTGTGGCATCATCACACCTACAAGATGAGTCAGTCAGTTAGGCAGCTCTCAGGTTGCAAGGAACTGCTTTTACAAGCATTCCTAATTAGGTCAATTGGCAAAAGAGATAACGAATCAGCCATCTACAACAGCCTATTCCTGACAGTAATAAGAACAACTCATTTTACCACATCAAGCCCCATGACAGGTGCAGTTTGCACAGAAGACCCATACATAAGCCATAAGCTGCATCACACCTGCTATAGAAAAGAAGGGGGTGAGGTATTTGAAATCTCACTTTGAATGGAAGTtatgaatgtataattttaGCAGTGTTAACCAAATAgttaacaaacattattttttgtgtgcagtgAAACTCAGTTCAGGGCATTGTAGGAAGGTAGAAATCCACAAGTGTCTTATTATAATATGGTTTTCTTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88555 True 2902 lncRNA 0.39 2 17250319 17253671

Neighbor

gene id symbol gene type direction distance location
AMCG00014536 gdap2,LOC104943794,LOC104954255 coding upstream 484767 16737483 ~ 16765552 (+)
AMCG00014538 NA coding upstream 518450 16722198 ~ 16731869 (+)
AMCG00014537 NA coding upstream 530582 16692012 ~ 16719737 (+)
AMCG00014535 tbx15,LOC107712261,LOC107724509 coding upstream 638658 16583824 ~ 16611661 (+)
AMCG00014531 wars2,LOC106531917 coding upstream 672162 16557564 ~ 16578157 (+)
AMCG00014552 NA coding downstream 75242 17328913 ~ 17332815 (+)
AMCG00014560 NA coding downstream 525894 17779565 ~ 17780081 (+)
AMCG00014565 NA coding downstream 695889 17949560 ~ 18029896 (+)
AMCG00014564 NA coding downstream 784437 18038108 ~ 18067182 (+)
AMCG00014563 klf5,LOC107757638,LOC102777034 coding downstream 816863 18070534 ~ 18080340 (+)
G70846 NA non-coding upstream 77257 17132063 ~ 17173062 (+)
G70835 NA non-coding upstream 152355 17028960 ~ 17097964 (+)
G70776 NA non-coding upstream 516682 16730878 ~ 16733637 (+)
G70735 NA non-coding upstream 759201 16490411 ~ 16491118 (+)
G70637 NA non-coding upstream 1009981 16237110 ~ 16240338 (+)
G70883 NA non-coding downstream 62582 17316253 ~ 17317556 (+)
G70897 NA non-coding downstream 95765 17349436 ~ 17350952 (+)
G70908 NA non-coding downstream 236155 17489826 ~ 17490607 (+)
G70938 LOC107575789,LOC100846954 non-coding downstream 397100 17650771 ~ 17651002 (+)
G71036 kctd12 non-coding downstream 1211548 18465219 ~ 18468335 (+)
AMCG00014525 NA other upstream 781110 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 1111287 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 1564420 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 2007986 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 2893451 14302447 ~ 14356868 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 111127 17364798 ~ 17487050 (+)
G71004 NA other downstream 1018183 18271854 ~ 18274360 (+)
G71525 NA other downstream 5601671 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 9651206 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 10581832 27835503 ~ 27841871 (+)

Expression


Co-expression Network