G71036 (kctd12)


Basic Information

Item Value
gene id G71036
gene name kctd12
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18465219 ~ 18468335 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU88777
TAGACTTTATTTTATGAATCTGAACTAATTTAAGAATGTCAGGAGTACAATGTTCAACACTTTTACAGGTTATTGCAGAGTCAGacagatgtaaaatatatagggcgatacacaaaacaaattggGGGGAAAATGCATTTGGTCAAAGACGCTTTCGAAATTACAAATAGGATGCACTGATATAAAGAATATGTAGGGGATTCCAaaaatattgttctgtttttcccaGTGCCTCTACAGCTTCAGAATcacctgttgtgtttttcaatggTAGTCATGATTTCATTGCAACTGGAAGATATTGTATCTCATTCAGTATGTTTTTGATAAAGGGGCCATGGCTCTCTTCTCTTATCTACCCACTGGCTCTTTTCAGAAGAAAGATTTAAACAATTCAAAGAATACACTGGCGTTTCTTTCCCTGGGACATCATCGGTCTGCCTGTTTCTGGAAAGGGGGCAACAATAAGAGATCAAAGCACTCATTCTAggtcttatttttaattgctcGTCTAGTAGGATTTAAAAACCAGAGCAGTACACAGTGCACTTTGTACTGAAAGCACAATGTGTGAAATCAAAAAATTTACTTATACCTTTTACTTTAGAAACACTTGCAAAGAAGTAATgtttgcaaagaagaaaaaaacaggctgGCTATGTTACTTTAACAGCTGCGGTAGCACAGGAGGAAGTAGCAtatactgtttttaaaactcTGCTACTTTCTCTTCAGATCTTGAAAGGGGAAGTTTGTGTGgctgtacaaatatatattaaagggaGAACATATTAAAGGGGGAGTGGTCATTGtgcatattaatgtgttttaaagtatCGCATTGATATAGAATCTGCAGGGCTTTAATGAGTTCATTTTTGCTTAATTACTATACACTGTAGTTTTAAATTGACAAGACTTACGTTAGCTTTGAGTTGtccaaaacatgtatttcactttttattttttagaaaagcATTGCAGTGCTACTGAAACTACAGCAAGTGCTCATCTCAATCCATTTATTGTACGGaattaagaaaactaaatatggaGGTGATAAATTCACCTATAGCTAAGGAAtttgaaagttttaaaaatatgatatatttttttttttgtcttgttttttcctccaaaaTTTAGTGTCTTTATACTTTTTCTCACAGGTCACCAAACAGCAATTGAACTTGCAATATAAAAGTCATCACAAATACACGCCTatagaaatgttaaaacaacaagCTTTTGTTGTGTGTGCGCAACATTAATTTCCATGTAATACATTGTCTGTCAACCTATATCTAACATGTCTAAAGACAGTTATGCACAAAGCTAGAATAACTATTCCTTCTCATCAAAGCAGATACCAAAATCAGACCTCAGCGCCACAGTGGCTTCAGTATAATAAACCACTGAAACACCCTGCTTTTTTCATTCAATGTGTGcaaactgcagtttaaaataatggttATTGCACCTACTGGATTgataaatcaatgtttaatatcgaactttttgtttttataatatctTTGATAACAAACTTAAATTAATGTGACCTAATAACAGGGCTGTATCTGTGGAGATCATGTACAACTGTCCAAAACTAATAGGATTCAAATTGTGTGGGGCTGCTGTACATGGTTGTACCCTGGCGCATCCTAAACCAACTCCACTGATCATCAAAGTGAcatttgcaaaacatatttaaaagataaagttacatttttcctctcctttcccAAAACTCGAACAATTGGTGCTCATGACTGCAATGGAGTGTGCATATCTTCCAagttgcaatttttttttatttaaataaaatacttcaacaAGAGGACAGTGTCATGTTCTTCTCAAGTCCCCACAATCACGCAGATATTGGAAAACACAACTACAGGAGCTCTGCGATTTAATATAGCCATACAAATCAGCAACAGACAATGCAGTGTAAAGCAATTACACACACAGGACACCCTACATGTCCAATGTCAATCTGCAACACTTTAAACCGGAGTAACTACGtacagagaagggaaaaaagacCATTGACTGTACATTGTTAAAATGTCAGTATAAAAATAGGCGAaaaaccaaccaaaacaaaaaaaagtgcactACTTTAAAAAAAGGGGTGGTTTCGTTGTTTTTTGGTATCACTGGCTCACTTCACTCTCTCAGGCAGGAGTCAGTCTCTGCAGAAAACGTACTCCGTGTAGCTGGTCCAGATCTTGTCCTCGTTGGGGTCGCTGCTGGCGTAGGCGCAGGTGCCCGTGGAGCTGCAGGCCACCATGTGGAAGCCGGCCTCCGTCAGCCGGTCAAACGCCTGCTCCAGGAAGTTATATTTCAGGTAGTACCTGGAGGTGTACCTCTCCGGCGGCCGATCGGGGTCCCGGCTCTCGTTCAGCGTGTCTCCAAACACCTCCTTGGCCAGAGAGGTCTTCCCGCACACCGTGATCCTGGCCACCCTCCTGAACTTGGCATCGGTCTGCGTGTCTCTGCCGATGGTGTAGGAGCCCCTGTATCCGATCGTGATGTAGCCCGACTTTTTGGACTCCAGCGACGGGGAGCGGGGGTTGGCGGTGCCCGCTGGCGTCGCCTGGCGGGAGGGGTCCCAGCCGGCGCCGGAGCCCGCGAACGCCGCCGCCTCGTCCGGGTCGCCGGGGCAGACCTCCTCGCTGAGGGAGTTGTCCTTGCTCACCTTGGGGCTCAGGCGCTGGGACAGGTCGTGCAGCTGGAAGAACTGGGCTTCCCTCTGCAGCCGGCACTTCTCCGGGAAGTAGTCGGGCAACACCAGGTTGAGGTCCCGCAGGTAGTCCAGGATGTAGCGGAACAGAAAGCCGTCCCTGTCCAGAAAGTAGCGCCCTTTGCTGTCCCTCGCCAGCTCCTGCGGGCTCTTCTGGCTGAACATGCTCCACAGCAGCGAGTCCGGCACGGCGACCAGGGTGGTGTGCCGGGTCACGTACACCTGCCCCCCCACATTGAGCTCGATGATCTCCGAGAAAGGGGAGCCGGAGTCCCCGCCGTTAGAGAGCCCACCCGAGGCGTCTGCCAAAGCCATGTCTGCGCGGCTGTGAGCTGCACTCCGGCGGACTGAGGCAGGCAGGTCGGGCT

Function

symbol description
kctd12 Enables identical protein binding activity. Predicted to be involved in protein homooligomerization. Predicted to act upstream of or within regulation of G protein-coupled receptor signaling pathway. Predicted to be located in cell projection. Predicted to be part of receptor complex. Predicted to be active in postsynaptic membrane and presynaptic membrane.

NR:

description
PREDICTED: BTB/POZ domain-containing protein KCTD12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88777 True 3117 lncRNA 0.44 1 18465219 18468335

Neighbor

gene id symbol gene type direction distance location
AMCG00014574 NA coding upstream 69619 18374644 ~ 18395600 (+)
AMCG00014569 NA coding upstream 132805 18324270 ~ 18332414 (+)
AMCG00014563 klf5,LOC107757638,LOC102777034 coding upstream 384879 18070534 ~ 18080340 (+)
AMCG00014564 NA coding upstream 398037 18038108 ~ 18067182 (+)
AMCG00014565 NA coding upstream 435323 17949560 ~ 18029896 (+)
AMCG00014573 NA coding downstream 2216 18470551 ~ 18475184 (+)
AMCG00014575 NA coding downstream 10074 18478409 ~ 18480032 (+)
AMCG00014583 NA coding downstream 118099 18586434 ~ 18609444 (+)
AMCG00014580 NA coding downstream 142225 18610560 ~ 18624589 (+)
AMCG00014582 wbp4 coding downstream 158224 18626559 ~ 18632690 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 814217 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 974612 17489826 ~ 17490607 (+)
G70897 NA non-coding upstream 1114267 17349436 ~ 17350952 (+)
G70883 NA non-coding upstream 1147663 17316253 ~ 17317556 (+)
G70865 NA non-coding upstream 1211548 17250319 ~ 17253671 (+)
G71038 NA non-coding downstream 8708 18477043 ~ 18478028 (+)
G71136 NA non-coding downstream 220213 18688548 ~ 18692633 (+)
G71183 NA non-coding downstream 432890 18901225 ~ 18902161 (+)
G71237 NA non-coding downstream 579623 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 749982 19218317 ~ 19222919 (+)
G71004 NA other upstream 190859 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 978169 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 1996010 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2326187 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 2779320 15675631 ~ 15685899 (+)
G71525 NA other downstream 4387007 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8436542 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 9367168 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 9400368 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9834038 28302373 ~ 28304073 (+)

Expression


Co-expression Network