G71362


Basic Information

Item Value
gene id G71362
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19924902 ~ 19925198 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89246
cttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctccggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtacacagtatccagatgagctctaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89246 True 297 lncRNA 0.49 1 19924902 19925198

Neighbor

gene id symbol gene type direction distance location
AMCG00014617 NA coding upstream 80860 19843152 ~ 19844042 (+)
AMCG00014605 NA coding upstream 540583 19380431 ~ 19384319 (+)
AMCG00014611 LOC107384298,LOC104941757 coding upstream 593984 19319869 ~ 19330918 (+)
AMCG00014606 NA coding upstream 607647 19296416 ~ 19317255 (+)
AMCG00014609 ednrb,LOC108434743,LOC107658690,LOC107566659,LOC105911940 coding upstream 633152 19285333 ~ 19291750 (+)
AMCG00014618 NA coding downstream 34391 19959589 ~ 20021694 (+)
AMCG00014619 NA coding downstream 99323 20024521 ~ 20073070 (+)
AMCG00014624 NA coding downstream 721141 20646339 ~ 20667180 (+)
AMCG00014632 nfip2,LOC107750051 coding downstream 2322583 22247781 ~ 22264000 (+)
AMCG00014635 NA coding downstream 4457569 24382767 ~ 24385815 (+)
G71283 tpt1,LOC106582181 non-coding upstream 701983 19218317 ~ 19222919 (+)
G71237 NA non-coding upstream 876730 19047958 ~ 19048172 (+)
G71183 NA non-coding upstream 1022741 18901225 ~ 18902161 (+)
G71136 NA non-coding upstream 1232269 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 1446874 18477043 ~ 18478028 (+)
G71378 NA non-coding downstream 261416 20186614 ~ 20186966 (+)
G71414 NA non-coding downstream 999370 20924568 ~ 20924837 (+)
G71424 NA non-coding downstream 1386392 21311590 ~ 21312022 (+)
G71452 NA non-coding downstream 2194385 22119583 ~ 22122533 (+)
G71459 NA non-coding downstream 2263441 22188639 ~ 22188927 (+)
G71004 NA other upstream 1650542 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 2437852 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 3455693 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 3785870 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 4239003 15675631 ~ 15685899 (+)
G71525 NA other downstream 2930144 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 6979679 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 7910305 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 7943505 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 8377175 28302373 ~ 28304073 (+)

Expression


Co-expression Network