G71378


Basic Information

Item Value
gene id G71378
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 20186614 ~ 20186966 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89263
gtggatgggtattcctgcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaatgtcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89263 True 353 lncRNA 0.48 1 20186614 20186966

Neighbor

gene id symbol gene type direction distance location
AMCG00014619 NA coding upstream 113544 20024521 ~ 20073070 (+)
AMCG00014618 NA coding upstream 164920 19959589 ~ 20021694 (+)
AMCG00014617 NA coding upstream 342572 19843152 ~ 19844042 (+)
AMCG00014605 NA coding upstream 802295 19380431 ~ 19384319 (+)
AMCG00014611 LOC107384298,LOC104941757 coding upstream 855696 19319869 ~ 19330918 (+)
AMCG00014624 NA coding downstream 459373 20646339 ~ 20667180 (+)
AMCG00014632 nfip2,LOC107750051 coding downstream 2060815 22247781 ~ 22264000 (+)
AMCG00014635 NA coding downstream 4195801 24382767 ~ 24385815 (+)
AMCG00014636 LOC108414264,LOC103139365,LOC102217784,LOC103461949 coding downstream 4505320 24692286 ~ 24759297 (+)
AMCG00014638 NA coding downstream 4701567 24888533 ~ 24897009 (+)
G71362 NA non-coding upstream 261416 19924902 ~ 19925198 (+)
G71283 tpt1,LOC106582181 non-coding upstream 963695 19218317 ~ 19222919 (+)
G71237 NA non-coding upstream 1138442 19047958 ~ 19048172 (+)
G71183 NA non-coding upstream 1284453 18901225 ~ 18902161 (+)
G71136 NA non-coding upstream 1493981 18688548 ~ 18692633 (+)
G71414 NA non-coding downstream 737602 20924568 ~ 20924837 (+)
G71424 NA non-coding downstream 1124624 21311590 ~ 21312022 (+)
G71452 NA non-coding downstream 1932617 22119583 ~ 22122533 (+)
G71459 NA non-coding downstream 2001673 22188639 ~ 22188927 (+)
G71460 NA non-coding downstream 2008653 22195619 ~ 22195875 (+)
G71004 NA other upstream 1912254 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 2699564 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 3717405 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 4047582 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 4500715 15675631 ~ 15685899 (+)
G71525 NA other downstream 2668376 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 6717911 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 7648537 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 7681737 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 8115407 28302373 ~ 28304073 (+)

Expression


Co-expression Network