G71525


Basic Information

Item Value
gene id G71525
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 22855342 ~ 22855646 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89430
tattaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcagccaaggctcattgatgcacgtggggagcaaaggctggccggtgtggtccgatccaacagacgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89430 True 305 TUCP 0.52 1 22855342 22855646

Neighbor

gene id symbol gene type direction distance location
AMCG00014632 nfip2,LOC107750051 coding upstream 591342 22247781 ~ 22264000 (+)
AMCG00014624 NA coding upstream 2188162 20646339 ~ 20667180 (+)
AMCG00014619 NA coding upstream 2782272 20024521 ~ 20073070 (+)
AMCG00014618 NA coding upstream 2833648 19959589 ~ 20021694 (+)
AMCG00014617 NA coding upstream 3011300 19843152 ~ 19844042 (+)
AMCG00014635 NA coding downstream 1527121 24382767 ~ 24385815 (+)
AMCG00014636 LOC108414264,LOC103139365,LOC102217784,LOC103461949 coding downstream 1836640 24692286 ~ 24759297 (+)
AMCG00014638 NA coding downstream 2032887 24888533 ~ 24897009 (+)
AMCG00014637 NA coding downstream 2072385 24928031 ~ 24937965 (+)
AMCG00014643 NA coding downstream 2231368 25087014 ~ 25102638 (+)
G71518 NA non-coding upstream 199728 22655358 ~ 22655614 (+)
G71462 NA non-coding upstream 624646 22228426 ~ 22230696 (+)
G71460 NA non-coding upstream 659467 22195619 ~ 22195875 (+)
G71459 NA non-coding upstream 666415 22188639 ~ 22188927 (+)
G71452 NA non-coding upstream 732809 22119583 ~ 22122533 (+)
G71557 NA non-coding downstream 509114 23364760 ~ 23365002 (+)
G71574 NA non-coding downstream 741472 23597118 ~ 23597323 (+)
G71581 NA non-coding downstream 849517 23705163 ~ 23705434 (+)
G71584 NA non-coding downstream 1052739 23908385 ~ 23908649 (+)
G71596 NA non-coding downstream 1476785 24332431 ~ 24333297 (+)
G71004 NA other upstream 4580982 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 5368292 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 6386133 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 6716310 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 7169443 15675631 ~ 15685899 (+)
AMCG00014687 NA other downstream 4049231 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 4979857 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 5013057 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 5446727 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 5941403 28797049 ~ 28837910 (+)

Expression


Co-expression Network