G71859


Basic Information

Item Value
gene id G71859
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26231219 ~ 26231565 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU89834
ccatgtcacaaaggtcgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatatatatatatatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89834 True 347 lncRNA 0.42 1 26231219 26231565

Neighbor

gene id symbol gene type direction distance location
AMCG00014664 zic2,LOC106586042 coding upstream 58745 26168461 ~ 26172474 (+)
AMCG00014665 NA coding upstream 107451 26085859 ~ 26123768 (+)
AMCG00014660 tm9sf2,LOC106574826,LOC107705039,LOC107719731,LOC107654273,LOC107556717 coding upstream 178676 26036433 ~ 26052543 (+)
AMCG00014661 gpr18,LOC107740919,LOC107681324,LOC107600424,LOC107748622,LOC107668869 coding upstream 289676 25934481 ~ 25941543 (+)
AMCG00014655 LOC107559785 coding upstream 532291 25660345 ~ 25698928 (+)
AMCG00014668 pcca,LOC107654247 coding downstream 86466 26318031 ~ 26335361 (+)
AMCG00014669 LOC107748618 coding downstream 141659 26373224 ~ 26389223 (+)
AMCG00014670 NA coding downstream 157667 26389232 ~ 26409091 (+)
AMCG00014676 itgbl1,LOC107748609,LOC107690616,LOC107681304 coding downstream 353916 26585481 ~ 26588394 (+)
AMCG00014677 LOC107600373,LOC107569583,LOC107690616,LOC107748609,LOC107731761,LOC107681305 coding downstream 393196 26624761 ~ 26628707 (+)
G71826 NA non-coding upstream 220219 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 271517 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 460730 25770209 ~ 25770489 (+)
G71763 NA non-coding upstream 468477 25705458 ~ 25762742 (+)
G71772 NA non-coding upstream 482811 25745803 ~ 25748408 (+)
G71963 NA non-coding downstream 720731 26952296 ~ 26953253 (+)
G71995 NA non-coding downstream 795210 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 1243499 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 2009001 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 2066104 28297669 ~ 28300813 (+)
G71525 NA other upstream 3375573 22855342 ~ 22855646 (+)
G71004 NA other upstream 7956859 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 8744169 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 9762010 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 10092187 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 673312 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 1603938 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 1637138 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 2070808 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 2565484 28797049 ~ 28837910 (+)

Expression


Co-expression Network