G72049


Basic Information

Item Value
gene id G72049
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27418816 ~ 27419045 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90058
TAACAGCCTGTGACTGCTGACTATATTCACCTGTGGCAGTGGATGAAGGAACAATGTTTACTTAGCTTATGTTCAGCTTAATTTTAATAACATCACATTTTTAACGTTAGTCTAATCTAATACCGagttttaataattaagtgcCAGTAACAATGTTAGGGAGGAGTGTCACATTCATTTACTTAAGAAATGCACAAGTTAGTAATTAGTAAGGCATCTGATAGTAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90058 True 230 lncRNA 0.33 1 27418816 27419045

Neighbor

gene id symbol gene type direction distance location
AMCG00014698 NA coding downstream 13897 27397227 ~ 27404919 (-)
AMCG00014699 NA coding downstream 32189 27381186 ~ 27386627 (-)
AMCG00014700 NA coding downstream 41044 27373072 ~ 27377772 (-)
AMCG00014689 shox,LOC102229599 coding downstream 229298 27179103 ~ 27189518 (-)
AMCG00014688 NA coding downstream 384797 26980121 ~ 27034019 (-)
AMCG00014695 myh9,LOC103376082,LOC106601336,LOC100380669 coding upstream 1006 27420051 ~ 27421669 (-)
AMCG00014694 NA coding upstream 12206 27431251 ~ 27440929 (-)
AMCG00014696 NA coding upstream 22308 27441353 ~ 27466854 (-)
AMCG00014697 atg3,LOC107752093,LOC107659953 coding upstream 51244 27470289 ~ 27482680 (-)
AMCG00014702 ccdc80,LOC107695464,LOC107756780,LOC107673676,LOC107748150 coding upstream 72983 27492028 ~ 27509142 (-)
G71961 NA non-coding downstream 486179 26932268 ~ 26932637 (-)
G71882 NA non-coding downstream 1083816 26334655 ~ 26335000 (-)
G71880 NA non-coding downstream 1094562 26324038 ~ 26324254 (-)
G71879 NA non-coding downstream 1136851 26281374 ~ 26281965 (-)
G71876 NA non-coding downstream 1150409 26267867 ~ 26268407 (-)
G72089 NA non-coding upstream 111251 27530296 ~ 27530643 (-)
G72139 NA non-coding upstream 417294 27836339 ~ 27837927 (-)
G72146 NA non-coding upstream 437694 27856739 ~ 27861375 (-)
G72280 NA non-coding upstream 1159364 28578409 ~ 28578734 (-)
G72305 LOC100136012 non-coding upstream 1227450 28646495 ~ 28646811 (-)
AMCG00014692 LOC107756725 other downstream 49289 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 114219 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 5173901 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 8193586 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 8215249 19201803 ~ 19203567 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 910694 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 1970245 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 3422478 30841523 ~ 30846800 (-)
G73047 NA other upstream 4844122 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 5036261 32455306 ~ 32555945 (-)

Expression


Co-expression Network