G72089


Basic Information

Item Value
gene id G72089
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27530296 ~ 27530643 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90102
aacaacaacaaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtgtcttttatacaggtaacgagctgagattaggagcactctcttaaagggagcctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagtccatcgccaagcagcttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90102 True 326 lncRNA 0.42 2 27530296 27530643

Neighbor

gene id symbol gene type direction distance location
AMCG00014702 ccdc80,LOC107695464,LOC107756780,LOC107673676,LOC107748150 coding downstream 21154 27492028 ~ 27509142 (-)
AMCG00014697 atg3,LOC107752093,LOC107659953 coding downstream 47616 27470289 ~ 27482680 (-)
AMCG00014696 NA coding downstream 63442 27441353 ~ 27466854 (-)
AMCG00014694 NA coding downstream 89367 27431251 ~ 27440929 (-)
AMCG00014695 myh9,LOC103376082,LOC106601336,LOC100380669 coding downstream 108627 27420051 ~ 27421669 (-)
AMCG00014707 kdm6a coding upstream 187323 27717966 ~ 27762413 (-)
AMCG00014712 NA coding upstream 530985 28061628 ~ 28204961 (-)
AMCG00014713 NA coding upstream 688749 28219392 ~ 28220486 (-)
AMCG00014715 ddx3x,LOC108412429,LOC102776245,LOC107564811 coding upstream 758712 28289355 ~ 28315398 (-)
AMCG00014716 usp9x,LOC108272755,LOC107595873 coding upstream 810508 28341151 ~ 28380053 (-)
G72049 NA non-coding downstream 111251 27418816 ~ 27419045 (-)
G71961 NA non-coding downstream 597659 26932268 ~ 26932637 (-)
G71882 NA non-coding downstream 1195296 26334655 ~ 26335000 (-)
G71880 NA non-coding downstream 1206042 26324038 ~ 26324254 (-)
G71879 NA non-coding downstream 1248331 26281374 ~ 26281965 (-)
G72139 NA non-coding upstream 305696 27836339 ~ 27837927 (-)
G72146 NA non-coding upstream 326096 27856739 ~ 27861375 (-)
G72280 NA non-coding upstream 1047766 28578409 ~ 28578734 (-)
G72305 LOC100136012 non-coding upstream 1115852 28646495 ~ 28646811 (-)
G72306 NA non-coding upstream 1124923 28655566 ~ 28655765 (-)
AMCG00014692 LOC107756725 other downstream 160769 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 225699 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 5285381 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 8305066 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 8326729 19201803 ~ 19203567 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 799096 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 1858647 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 3310880 30841523 ~ 30846800 (-)
G73047 NA other upstream 4732524 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 4924663 32455306 ~ 32555945 (-)

Expression


Co-expression Network