Gene
RNA
| Item | Value |
|---|---|
| gene id | G72305 |
| gene name | LOC100136012 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 28646495 ~ 28646811 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU90377 | True | 317 | lncRNA | 0.47 | 1 | 28646495 | 28646811 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014718 | NA | coding | downstream | 151469 | 28494507 ~ 28495026 (-) |
| AMCG00014719 | NA | coding | downstream | 152009 | 28494106 ~ 28494486 (-) |
| AMCG00014717 | NA | coding | downstream | 155932 | 28487629 ~ 28490563 (-) |
| AMCG00014716 | usp9x,LOC108272755,LOC107595873 | coding | downstream | 266442 | 28341151 ~ 28380053 (-) |
| AMCG00014715 | ddx3x,LOC108412429,LOC102776245,LOC107564811 | coding | downstream | 331097 | 28289355 ~ 28315398 (-) |
| AMCG00014730 | NA | coding | upstream | 283554 | 28930365 ~ 28951352 (-) |
| AMCG00014731 | NA | coding | upstream | 349125 | 28995936 ~ 29013055 (-) |
| AMCG00014732 | NA | coding | upstream | 376967 | 29023778 ~ 29031908 (-) |
| AMCG00014735 | NA | coding | upstream | 704937 | 29351748 ~ 29383448 (-) |
| AMCG00014742 | sik1,LOC105911651 | coding | upstream | 807231 | 29454042 ~ 29463876 (-) |
| G72280 | NA | non-coding | downstream | 67761 | 28578409 ~ 28578734 (-) |
| G72146 | NA | non-coding | downstream | 785120 | 27856739 ~ 27861375 (-) |
| G72139 | NA | non-coding | downstream | 808568 | 27836339 ~ 27837927 (-) |
| G72089 | NA | non-coding | downstream | 1115852 | 27530296 ~ 27530643 (-) |
| G72049 | NA | non-coding | downstream | 1227450 | 27418816 ~ 27419045 (-) |
| G72306 | NA | non-coding | upstream | 8755 | 28655566 ~ 28655765 (-) |
| G72307 | NA | non-coding | upstream | 11266 | 28658077 ~ 28658299 (-) |
| G72317 | NA | non-coding | upstream | 27570 | 28674381 ~ 28766089 (-) |
| G72318 | NA | non-coding | upstream | 120789 | 28767600 ~ 28768329 (-) |
| G72323 | lrrc58,LOC102790154 | non-coding | upstream | 128470 | 28775281 ~ 28775737 (-) |
| G72236 | rpl8,LOC107595836,LOC107748161 | other | downstream | 314013 | 28329739 ~ 28332482 (-) |
| AMCG00014692 | LOC107756725 | other | downstream | 1276968 | 27335695 ~ 27369527 (-) |
| AMCG00014693 | NA | other | downstream | 1341898 | 27285420 ~ 27304597 (-) |
| AMCG00014630 | LOC107672672 | other | downstream | 6401580 | 22225924 ~ 22244915 (-) |
| AMCG00014603 | tpt1,LOC106582181 | other | downstream | 9421265 | 19217722 ~ 19225230 (-) |
| G72477 | LOC106598269,LOC101158751,LOC106586690,LOC103361283 | other | upstream | 742479 | 29389290 ~ 29398305 (-) |
| AMCG00014775 | NA | other | upstream | 2194712 | 30841523 ~ 30846800 (-) |
| G73047 | NA | other | upstream | 3616356 | 32263167 ~ 32263427 (-) |
| AMCG00014816 | NA | other | upstream | 3808495 | 32455306 ~ 32555945 (-) |
| G73127 | NA | other | upstream | 3950651 | 32597462 ~ 32619149 (-) |
