G72785 (fam160a2)


Basic Information

Item Value
gene id G72785
gene name fam160a2
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30978216 ~ 30978825 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90965
GACAGAAGTAGGAGTTCTCGGCGATGTACTGTGCCACGGCCTGGCTGTCGGCGGAGGTCGCCATGACAAGGAGGAGGGCGTCACGAGCCTGCTGGCCAATGGCTCCATCACGGTGGATGAAGGGCACCAGCAGGGAGAAGATGAGCAGATTGGTGGGGCCTTGCTGGGAGGCAGCACGGAACAGCAGCTCCAAGATGGAGGGCTCCCTGGCCATGGAGACGCACACCTGGTtcagcagcagcaccaggcTCCCCTCCACCGCAGGAGAGCCCAGCTGGGGATCGGCGCACGTGCTCAGCAAGGAGAGGAGGGGCTGCAGCACGGGCTTGTGCTGAAGCAAGGGCTGCTGGGACTGGCCGATCAGCATCTCAAAGAGCTTGAGCAGCGCCCCCTGGCTGTCGGGGTCCAGGCCACGGCGCAGGTGCCACTGCACCAGCCGCTCCAGGATATTCTCGGACACCACCAGCTCCAGAATGGGTCCCATAGCCATCTGGTCCCCTGGCCGCTCCTCCGCCAGCAGGCACAGCATCTGATCGGTGTGGTTCCGCACGGCGCTCAGCTCGTCTGCTGCACCAGTGATGGAGCTCTCGCGCTGCTCCAGGATCCACGA

Function

symbol description
fam160a2 Predicted to be involved in several processes, including early endosome to late endosome transport; endosome to lysosome transport; and protein localization to perinuclear region of cytoplasm. Predicted to act upstream of or within protein transport. Predicted to be part of FHF complex. Orthologous to human FHIP1B (FHF complex subunit HOOK interacting protein 1B).

NR:

description
PREDICTED: FTS and Hook-interacting protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90965 True 610 TUCP 0.65 1 30978216 30978825

Neighbor

gene id symbol gene type direction distance location
AMCG00014781 NA coding upstream 60650 30907169 ~ 30917566 (+)
AMCG00014771 NA coding upstream 127074 30847172 ~ 30851142 (+)
AMCG00014768 NA coding upstream 237072 30728363 ~ 30741144 (+)
AMCG00014774 NA coding upstream 267796 30700206 ~ 30710420 (+)
AMCG00014779 NA coding upstream 317621 30659601 ~ 30660595 (+)
AMCG00014784 NA coding downstream 44718 31023543 ~ 31027002 (+)
AMCG00014783 NA coding downstream 63066 31041891 ~ 31044741 (+)
AMCG00014787 vangl1,LOC106574540 coding downstream 262476 31241301 ~ 31264255 (+)
AMCG00014788 poglut1 coding downstream 318925 31297750 ~ 31308262 (+)
AMCG00014792 NA coding downstream 334148 31312973 ~ 31330675 (+)
G72783 NA non-coding upstream 21932 30955905 ~ 30956284 (+)
G72769 NA non-coding upstream 131795 30846162 ~ 30846421 (+)
G72768 NA non-coding upstream 133546 30841560 ~ 30844670 (+)
G72767 NA non-coding upstream 141047 30836836 ~ 30837169 (+)
G72426 NA non-coding upstream 1785938 29191971 ~ 29192278 (+)
G72789 NA non-coding downstream 24547 31003372 ~ 31003788 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding downstream 299262 31278087 ~ 31287434 (+)
G72861 NA non-coding downstream 483321 31462146 ~ 31463811 (+)
G72875 LOC103376870 non-coding downstream 545490 31524315 ~ 31592105 (+)
G72911 NA non-coding downstream 723337 31702162 ~ 31702435 (+)
AMCG00014777 NA other upstream 165929 30764351 ~ 30812287 (+)
G72605 NA other upstream 1126395 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 1131630 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1699067 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1721862 29247875 ~ 29256354 (+)
G72786 NA other downstream 745 30979570 ~ 30980252 (+)
G72787 NA other downstream 11238 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 164598 31143423 ~ 31147877 (+)
AMCG00014793 NA other downstream 533983 31512808 ~ 31523187 (+)
G72925 NA other downstream 738293 31717118 ~ 31754930 (+)

Expression


Co-expression Network