G72861


Basic Information

Item Value
gene id G72861
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31462146 ~ 31463811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91052
ctcatattttatttttgacatttatttataatgtgacAAAccttagaaaaaataaaactacaatgtATCCATagtcaaaaaggaaaataaaatttcaaaactttattttttacaaaattctCAGTGCCTTCTGATACTATTTTAACACACATAAATGGTCTTCTTTCCTTATTGCCATTCCAATACAAATGatgcatgttttatgtataatgCAACAAAGGAATAATGTTAGCTAGATGtcagatatttgtatttaattgaacccaAACTCTATCTAGTATTTAATTCCATACCATGTTGTTCATCTTTGGTGTCATATATGTAGAATCTGAACTCACAAACAACTAGAATTTAGtgagattaaacaaaaagatatatttgtttttcttcaattggAAATAGATAGCCACCTGGCTTACAAAATAAGTAGCAGAAGGATTTTCAATAAAGACAGCAAAAGTAAAAAACACTAAAAGAGATTGCCAAGTAATTCTGCCAGTACAATTAGCAAATTAAGTGTAAAGTTGGtatttttcacagtttgttcTTACACAGACATCTCTGTTCAGGATTAGGTAGGATTGGTTTATTGCCAACTGACATCTAACCACACATTGCaaaatttctttttttgtgctgtATCGGGTCTCGGTctaaaaactatttgtttttattgaacaaCTAATACTATAGAACAGATACAGGTCTCAGAATTAGTCATTCTGAATTCACAAAACTACTGCAGCAGTGCACTGTACACAGCAACCCAAGACTGAGAATTAggtaaaagctttttcttttctttttttttctcattacactttaaaacacaGCTGGTAAGCAGAGAGATTACAAATATCTACACATATgtccagaaaaaaaatctttaaaatcaaCAATAAGCAGAACATCATAAAATAGAGGAAATTAAACCATGTGGTGTACAATCTACTCTTCTGCACCTTCAGTCCAAATTTAGATGACTTTGAGGGACTCGGAATGTGTACcatctgatttgtatttaattaaaccccactgaagaagaaaaacacttgtCATAACCCCCAGGTAAACATACCTGAAACACATGAGCAGATACATTACAAGGGAGCAGAACAGAAAGAACTTGCAGGTATCAACCTACTGTTTTTCTCCAATTGGGGTTTGGAGGagtaaaacagacacaaacaatgGATTCAGATTTCTTTGGGCACAGAACATTCTGTATTCTGAGAAAGCTTCAATGTTTAAGGTCTATACTGAGAGCAAACCAACTGGAATTACAGAAGGAATtcacaatacaaacatattGAATTGAAGGACATATAGTATAGCAGTGGTACACAGATAACTGATCATGACattctgtataggaaagttttttttattatcagcaGCCACATCATTGCCTTCCATGATTATCAtggatatatattgttttgatgcACGTACACTAGTAGTCATATCAGTTGCTGGTGTGCCACAGTGAACTTTTTATTCCAGCTggagctttcaattacttaattaacccTGTTAAACCTTAATTAAACCTGTTGATTTTAAGTATTCAACACACATAACATGATGTTAAAGACCTTTACTCTTCATAGCTTAGCTGACATAATTTGcagcatgcatatatatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91052 True 1666 lncRNA 0.32 1 31462146 31463811

Neighbor

gene id symbol gene type direction distance location
AMCG00014792 NA coding upstream 131471 31312973 ~ 31330675 (+)
AMCG00014788 poglut1 coding upstream 153884 31297750 ~ 31308262 (+)
AMCG00014787 vangl1,LOC106574540 coding upstream 197891 31241301 ~ 31264255 (+)
AMCG00014783 NA coding upstream 417405 31041891 ~ 31044741 (+)
AMCG00014784 NA coding upstream 435144 31023543 ~ 31027002 (+)
AMCG00014800 NA coding downstream 217720 31681531 ~ 31696173 (+)
AMCG00014801 NA coding downstream 243437 31707248 ~ 31709519 (+)
AMCG00014798 NA coding downstream 263475 31727286 ~ 31741350 (+)
AMCG00014804 NA coding downstream 289465 31753276 ~ 31763835 (+)
AMCG00014805 NA coding downstream 300369 31764180 ~ 31765038 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding upstream 174712 31278087 ~ 31287434 (+)
G72789 NA non-coding upstream 458358 31003372 ~ 31003788 (+)
G72783 NA non-coding upstream 505862 30955905 ~ 30956284 (+)
G72769 NA non-coding upstream 615725 30846162 ~ 30846421 (+)
G72768 NA non-coding upstream 617476 30841560 ~ 30844670 (+)
G72875 LOC103376870 non-coding downstream 60504 31524315 ~ 31592105 (+)
G72911 NA non-coding downstream 238351 31702162 ~ 31702435 (+)
G72912 NA non-coding downstream 239335 31703146 ~ 31703573 (+)
G72926 NA non-coding downstream 281712 31745523 ~ 31746900 (+)
G73017 NA non-coding downstream 502111 31965922 ~ 31966189 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 314269 31143423 ~ 31147877 (+)
G72787 NA other upstream 465783 30990063 ~ 30996363 (+)
G72786 NA other upstream 481894 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 483321 30978216 ~ 30978825 (+)
AMCG00014777 NA other upstream 649859 30764351 ~ 30812287 (+)
AMCG00014793 NA other downstream 48997 31512808 ~ 31523187 (+)
G72925 NA other downstream 253307 31717118 ~ 31754930 (+)
AMCG00014799 NA other downstream 327090 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 475742 31939553 ~ 31962971 (+)
G73103 NA other downstream 1078699 32542510 ~ 32561489 (+)

Expression


Co-expression Network