G72862


Basic Information

Item Value
gene id G72862
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31462179 ~ 31463783 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91053
atgcatgctgCAAATTATGTCAGCTAAGCTATGAAGAGTAAAGGTCTTTAACATCATGTTATGTGTGTTGAATACTTAAAATCAACAGGTTTAATTAAGGTTTAACAgggttaattaagtaattgaaagctccAGCTGGAATAAAAAGTTCACTGTGGCACACCAGCAACTGATATGACTACTAGTGTACGTgcatcaaaacaatatatatccaTGATAATCATGGAAGGCAATGATGTGGCtgctgataataaaaaaaactttcctatacagaatGTCATGATCAGTTATCTGTGTACCACTGCTATACTATATGTCCTTCAATTCaatatgtttgtattgtgaATTCCTTCTGTAATTCCAGTTGGTTTGCTCTCAGTATAGACCTTAAACATTGAAGCTTTCTCAGAATACAGAATGTTCTGTGCCCAAAGAAATCTGAATCcattgtttgtgtctgttttactCCTCCAAACCCCAATTGGAGAAAAACAGTAGGTTGATACCTGCAAGTTCTTTCTGTTCTGCTCCCTTGTAATGTATCTGCTCATGTGTTTCAGGTATGTTTACCTGGGGGTTATGacaagtgtttttcttcttcagtggggtttaattaaatacaaatcagatgGTACACATTCCGAGTCCCTCAAAGTCATCTAAATTTGGACTGAAGGTGCAGAAGAGTAGATTGTACACCACATGGTTTAATTTCCTCTATTTTATGATGTTCTGCTTATTGttgattttaaagattttttttctggacATATGTGTAGATATTTGTAATCTCTCTGCTTACCAGCtgtgttttaaagtgtaatgagaaaaaaaaagaaaagaaaaagcttttaccTAATTCTCAGTCTTGGGTTGCTGTGTACAGTGCACTGCTGCAGTAGTTTTGTGAATTCAGAATGACTAATTCTGAGACCTGTATCTGTTCTATAGTATTAGttgttcaataaaaacaaatagtttttagACCGAGACCCGATacagcacaaaaaaagaaattttGCAATGTGTGGTTAGATGTCAGTTGGCAATAAACCAATCCTACCTAATCCTGAACAGAGATGTCTGTGTAAgaacaaactgtgaaaaataCCAACTTTACACTTAATTTGCTAATTGTACTGGCAGAATTACTTGGCAATCTCTTTTAGTGTTTTTTACTTTTGCTGTCTTTATTGAAAATCCTTCTGCTACTTATTTTGTAAGCCAGGTGGCTATCTATTTccaattgaagaaaaacaaatatatctttttgtttaatctcaCTAAATTCTAGTTGTTTGTGAGTTCAGATTCTACATATATGACACCAAAGATGAACAACATGGTATGGAATTAAATACTAGATAGAGTTtgggttcaattaaatacaaatatctgaCATCTAGCTAACATTATTCCTTTGTTGcattatacataaaacatgcatCATTTGTATTGGAATGGCAATAAGGAAAGAAGACCATTTATGTGTGTTAAAATAGTATCAGAAGGCACTGagaattttgtaaaaaataaagttttgaaattttattttcctttttgactATGGATacattgtagttttattttttctaaggTTTgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91053 True 1605 lncRNA 0.33 1 31462179 31463783

Neighbor

gene id symbol gene type direction distance location
AMCG00014789 NA coding downstream 116749 31337113 ~ 31345430 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding downstream 169444 31279314 ~ 31292735 (-)
AMCG00014791 LOC106574540 coding downstream 183049 31261716 ~ 31279130 (-)
AMCG00014785 NA coding downstream 482302 30952471 ~ 30979877 (-)
AMCG00014782 NA coding downstream 536972 30922355 ~ 30925207 (-)
AMCG00014796 NA coding upstream 5776 31469559 ~ 31471622 (-)
AMCG00014794 NA coding upstream 65214 31528997 ~ 31578588 (-)
AMCG00014795 LOC107746280 coding upstream 130608 31594391 ~ 31620377 (-)
AMCG00014797 NA coding upstream 236844 31700627 ~ 31707522 (-)
AMCG00014806 NA coding upstream 305790 31769573 ~ 31789737 (-)
G72791 NA non-coding downstream 510804 30950110 ~ 30951375 (-)
G72790 NA non-coding downstream 514836 30946090 ~ 30947343 (-)
G72693 NA non-coding downstream 1066841 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 1200575 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 1250783 30211142 ~ 30211396 (-)
G72868 NA non-coding upstream 2709 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 17065 31480848 ~ 31485466 (-)
G72874 NA non-coding upstream 51647 31515430 ~ 31519932 (-)
G72919 NA non-coding upstream 233872 31697655 ~ 31698012 (-)
G73005 NA non-coding upstream 433157 31896940 ~ 31898945 (-)
AMCG00014775 NA other downstream 615379 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 2063874 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 3129697 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 4092652 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 4157582 27285420 ~ 27304597 (-)
G73047 NA other upstream 799384 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 991523 32455306 ~ 32555945 (-)
G73127 NA other upstream 1133679 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1331222 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 1606466 33070249 ~ 33119328 (-)

Expression


Co-expression Network