Gene
RNA
| Item | Value |
|---|---|
| gene id | G72874 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 31515430 ~ 31519932 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:1905039 | carboxylic acid transmembrane transport | biological_process |
| GO:0098656 | anion transmembrane transport | biological_process |
| GO:1903825 | organic acid transmembrane transport | biological_process |
| GO:1990542 | mitochondrial transmembrane transport | biological_process |
| GO:0015718 | monocarboxylic acid transport | biological_process |
| GO:0006839 | mitochondrial transport | biological_process |
| GO:0006848 | pyruvate transport | biological_process |
| GO:0006850 | mitochondrial pyruvate transmembrane transport | biological_process |
| GO:1901475 | pyruvate transmembrane transport | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0022890 | inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015002 | heme-copper terminal oxidase activity | molecular_function |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | molecular_function |
| GO:0015075 | ion transmembrane transporter activity | molecular_function |
| GO:0015077 | monovalent inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| GO:0016675 | oxidoreductase activity, acting on a heme group of donors | molecular_function |
| GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU91073 | True | 1710 | lncRNA | 0.42 | 3 | 31515430 | 31519849 |
| TU91074 | False | 435 | lncRNA | 0.41 | 2 | 31515430 | 31519932 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014796 | NA | coding | downstream | 43808 | 31469559 ~ 31471622 (-) |
| AMCG00014789 | NA | coding | downstream | 170000 | 31337113 ~ 31345430 (-) |
| AMCG00014790 | casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 | coding | downstream | 222695 | 31279314 ~ 31292735 (-) |
| AMCG00014791 | LOC106574540 | coding | downstream | 236300 | 31261716 ~ 31279130 (-) |
| AMCG00014785 | NA | coding | downstream | 535553 | 30952471 ~ 30979877 (-) |
| AMCG00014794 | NA | coding | upstream | 9065 | 31528997 ~ 31578588 (-) |
| AMCG00014795 | LOC107746280 | coding | upstream | 74459 | 31594391 ~ 31620377 (-) |
| AMCG00014797 | NA | coding | upstream | 180695 | 31700627 ~ 31707522 (-) |
| AMCG00014806 | NA | coding | upstream | 249641 | 31769573 ~ 31789737 (-) |
| AMCG00014809 | NA | coding | upstream | 447512 | 31967444 ~ 31969223 (-) |
| G72867 | NA | non-coding | downstream | 29964 | 31480848 ~ 31485466 (-) |
| G72868 | NA | non-coding | downstream | 48374 | 31466492 ~ 31467056 (-) |
| G72862 | NA | non-coding | downstream | 51647 | 31462179 ~ 31463783 (-) |
| G72791 | NA | non-coding | downstream | 564055 | 30950110 ~ 30951375 (-) |
| G72790 | NA | non-coding | downstream | 568087 | 30946090 ~ 30947343 (-) |
| G72919 | NA | non-coding | upstream | 177723 | 31697655 ~ 31698012 (-) |
| G73005 | NA | non-coding | upstream | 377008 | 31896940 ~ 31898945 (-) |
| G73046 | NA | non-coding | upstream | 736223 | 32256155 ~ 32256775 (-) |
| G73049 | NA | non-coding | upstream | 745200 | 32265132 ~ 32265424 (-) |
| G73066 | NA | non-coding | upstream | 837770 | 32357702 ~ 32362393 (-) |
| AMCG00014775 | NA | other | downstream | 668630 | 30841523 ~ 30846800 (-) |
| G72477 | LOC106598269,LOC101158751,LOC106586690,LOC103361283 | other | downstream | 2117125 | 29389290 ~ 29398305 (-) |
| G72236 | rpl8,LOC107595836,LOC107748161 | other | downstream | 3182948 | 28329739 ~ 28332482 (-) |
| AMCG00014692 | LOC107756725 | other | downstream | 4145903 | 27335695 ~ 27369527 (-) |
| AMCG00014693 | NA | other | downstream | 4210833 | 27285420 ~ 27304597 (-) |
| G73047 | NA | other | upstream | 743235 | 32263167 ~ 32263427 (-) |
| AMCG00014816 | NA | other | upstream | 935374 | 32455306 ~ 32555945 (-) |
| G73127 | NA | other | upstream | 1077530 | 32597462 ~ 32619149 (-) |
| AMCG00014824 | NA | other | upstream | 1275073 | 32795005 ~ 32806295 (-) |
| AMCG00014825 | NA | other | upstream | 1550317 | 33070249 ~ 33119328 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
