G72911


Basic Information

Item Value
gene id G72911
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31702162 ~ 31702435 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91126
GGTCAATATAAACAACGCTGTGAGGGTTGCCCTTGGCAATGAAGCCATACTCCAGCAATAGACGCTGGTTGTCATGAGGCCCATAGCAGATGAAGGCCTGCTCATACTTCCTGCACCCTGGGCCTGTTCTGATCTCGTAGCATCTGGTCTTCTCGTTAAATGCAGCTTCCACCTATAAAAGCAACAGGAATGCTTACCAAACGCGTAGCCTATCTTCAGTAACCAGtcttgtattgattttaacttTCTGAATCTTAAAGATACTCTTAATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91126 True 274 lncRNA 0.45 1 31702162 31702435

Neighbor

gene id symbol gene type direction distance location
AMCG00014800 NA coding upstream 5989 31681531 ~ 31696173 (+)
AMCG00014792 NA coding upstream 371487 31312973 ~ 31330675 (+)
AMCG00014788 poglut1 coding upstream 393900 31297750 ~ 31308262 (+)
AMCG00014787 vangl1,LOC106574540 coding upstream 437907 31241301 ~ 31264255 (+)
AMCG00014783 NA coding upstream 657421 31041891 ~ 31044741 (+)
AMCG00014801 NA coding downstream 4813 31707248 ~ 31709519 (+)
AMCG00014798 NA coding downstream 24851 31727286 ~ 31741350 (+)
AMCG00014804 NA coding downstream 50841 31753276 ~ 31763835 (+)
AMCG00014805 NA coding downstream 61745 31764180 ~ 31765038 (+)
AMCG00014803 NA coding downstream 63629 31766064 ~ 31769661 (+)
G72875 LOC103376870 non-coding upstream 110057 31524315 ~ 31592105 (+)
G72861 NA non-coding upstream 238351 31462146 ~ 31463811 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding upstream 414728 31278087 ~ 31287434 (+)
G72789 NA non-coding upstream 698374 31003372 ~ 31003788 (+)
G72783 NA non-coding upstream 745878 30955905 ~ 30956284 (+)
G72912 NA non-coding downstream 711 31703146 ~ 31703573 (+)
G72926 NA non-coding downstream 43088 31745523 ~ 31746900 (+)
G73017 NA non-coding downstream 263487 31965922 ~ 31966189 (+)
G73018 NA non-coding downstream 264921 31967356 ~ 31969205 (+)
G73019 NA non-coding downstream 269550 31971985 ~ 31995538 (+)
AMCG00014793 NA other upstream 178975 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 554285 31143423 ~ 31147877 (+)
G72787 NA other upstream 705799 30990063 ~ 30996363 (+)
G72786 NA other upstream 721910 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 723337 30978216 ~ 30978825 (+)
G72925 NA other downstream 14683 31717118 ~ 31754930 (+)
AMCG00014799 NA other downstream 88466 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 237118 31939553 ~ 31962971 (+)
G73103 NA other downstream 840075 32542510 ~ 32561489 (+)
G73244 NA other downstream 1662320 33364755 ~ 33366100 (+)

Expression


Co-expression Network