G73158


Basic Information

Item Value
gene id G73158
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32672511 ~ 32681805 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91410
AATTCGAGTGACACAGAATTCATCGTAATAGCTGCTGTGCACTAACGAGATCAGATATGCCTATTGTATCATGATTGGCATTGTACGAAGATCAGGCTGAAGTGaactaattttgttttctgattataAACCTTGGTCTCGGGACTCTTAATAATGTATACTGACTGGCTCTTACACTGGTGTAATGACAGTAAAGATATCTCAAGGAAAATAACTtggaatatatttaatcttGCTTTCTGTTCATTTCTGCTTTTCCTCCCCCATCAAATATCAGTCCTGTACAGGTTAACTACAACCAGGCTCATAGCAAAACCCACAAAACTGTGGAGAGATGCATTGGAGTTTGGAAGAGGTGTTTTCACAACTTGCATGGAGAAATCAGAATGGCTCCGGATAGCAATTATTTTGCAACCGCAGGACTACACAATTTTGCAagacTTCAAAATCTTCGAGACCCTACAGATACCTTTCTTCCTGACGACTCTGTACCACAAGATTTAGCATGTAATGATGAAATGGAGAGTGCTGGGAGTTCAACAAGGACTGTGCTTACTAATAACTATCCttgaaataattcagaaataacagtaatggaaattggactacttatataatgaaatgtttaatttcattaataaaaactTACAAACATATCTATTATCTAGTATCtattataaagaatgacaaatgtattcacaaccTTAATAATTACAACTAATTACAACCAAATCAACAAATcttaataattacaacaatacTCTTCCCCTTTGAACTCTAATTTTCGAATCTTgccatttttaactttatcattttgatttctagatcaagGTTTTCCCTTTCCAACAATAGATTTCCCTTCTTGAGTTCCAACTCTTTAACGTGAAGGTCCTCTCTTTGAAtcctattttttatatttttagtctGAATGGGGCTGACATCTTcagaatctgcaattaaatcaGTTAATTACTTTTTGTTATGTAGTAGTTATGTAGCTGTATAAGCAATAATTGTAAATTTTCAATAGCCctatgttaaaatgtgtatttgcattAAACAGCACTCGTGTGTAATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91410 True 1080 lncRNA 0.34 4 32672511 32681805

Neighbor

gene id symbol gene type direction distance location
AMCG00014817 taf6 coding upstream 9357 32653743 ~ 32663154 (+)
AMCG00014815 gja8,LOC107746070,LOC107566528,LOC107566539,LOC107603011,LOC107746288,LOC107676899 coding upstream 275003 32396687 ~ 32397508 (+)
AMCG00014812 NA coding upstream 417220 32242954 ~ 32255291 (+)
AMCG00014810 NA coding upstream 658120 32013184 ~ 32014391 (+)
AMCG00014808 LOC107579096 coding upstream 756673 31896940 ~ 31915838 (+)
AMCG00014821 LOC107738524 coding downstream 53063 32734868 ~ 32756137 (+)
AMCG00014822 NA coding downstream 77160 32758965 ~ 32768979 (+)
AMCG00014827 NA coding downstream 1015718 33697523 ~ 33778248 (+)
AMCG00014831 NA coding downstream 2009280 34691085 ~ 34931860 (+)
AMCG00014833 NA coding downstream 2346052 35027857 ~ 35320982 (+)
G73120 NA non-coding upstream 96632 32575447 ~ 32575879 (+)
G73104 NA non-coding upstream 105615 32565793 ~ 32566896 (+)
G73105 NA non-coding upstream 108172 32558281 ~ 32564339 (+)
G73045 NA non-coding upstream 415735 32256009 ~ 32256776 (+)
G73019 NA non-coding upstream 676973 31971985 ~ 31995538 (+)
G73212 NA non-coding downstream 122863 32804668 ~ 32806309 (+)
G73220 NA non-coding downstream 388198 33070003 ~ 33070214 (+)
G73247 LOC100846954 non-coding downstream 773806 33455611 ~ 33645483 (+)
G73257 NA non-coding downstream 964119 33645924 ~ 33725262 (+)
G73261 NA non-coding downstream 1097418 33779223 ~ 33779473 (+)
G73103 NA other upstream 111022 32542510 ~ 32561489 (+)
AMCG00014811 NA other upstream 709540 31939553 ~ 31962971 (+)
AMCG00014799 NA other upstream 874048 31790901 ~ 31798463 (+)
G72925 NA other upstream 917581 31717118 ~ 31754930 (+)
AMCG00014793 NA other upstream 1149324 31512808 ~ 31523187 (+)
G73244 NA other downstream 682950 33364755 ~ 33366100 (+)
G73292 LOC100846954 other downstream 1557129 34238934 ~ 34239400 (+)
G73329 NA other downstream 2098317 34780122 ~ 34780590 (+)
G73343 NA other downstream 2260206 34942011 ~ 34960447 (+)
AMCG00014836 NA other downstream 2708829 35390634 ~ 35412587 (+)

Expression


Co-expression Network