G73343


Basic Information

Item Value
gene id G73343
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34942011 ~ 34960447 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91622
cacccccacccaacATGCAGCGAATCACTTCCTTACCTGCACCAGGACAGCTTTAGAACCAGTATGCTGAAAGCATCATTAGATCTTAATGTActacatacaaatacagtaatacataGGGGCATTGAGCCCATTCTTAGACAAAAAAAGGTTAATGATGCAAGACACTGcatcttcattttaattattacattatcttACGAAACATTACATCACAGAGGGTCTATGTTAAGATCACACAAGAAACTTTCTCCCACCAACCTTTAAACAGTTTCCTAAGAAAACCTTTGAATCAACATGTAGCTACCTAACTGTGTTCCTTGTAGTGGGCATCAATAGCTTGCAGCTGAAGATTTTGTTATGTAcctttaattatattatgtaattgtataattttagCCTGGTCTCATCAAATAACTTCTAATACTATACAATACAGGGCATGTCTTTCCTTGCCCAGAGCAGTAATTACATCTGCACCTGTGTGATCTTAAGATGAGAAGAAATGTTAGGGTTATTCAGTCGTTAGGATGGTCATGTTCAAATACACTAACTTACTTTAGAGCAGAACAATAAGAGTCACTACAAAAACAAGGCCTCTCAGCTCCTAGTAGCGCAAAACAACCTAGATATAGTCTTAAACactgttcaaaatatatatttttaaatcaagatcATTTCTCCAACCACTTCAATAactacaattaatataaattgagGCAtgatccattaaaaaaatactttgggAGATTCTACAGTCAAAGGATGATAAGTGAAAGTttcctgttaaaaacaaacaaaagaaacaggaTGGTGGATagtcaattaaaatcaaaagccTCCTCTCATTTAGAAAGATTGTTGAGCACAGCCCACATCAGTATAATAAGCCAACTTTTCAGACTTTCCAGAGAACACTTCAACATGAAGCTACCATACAGTTAAAAAGTACAAGCTGCAGAGTTCATTCAGTTGGTTTTAAAGAGAAGGATAGTTTGGGCCTAGACTTTCCCTTGCCCAAGATCAGTTTTTGCTCTTCTTTTTGCTGACGCTGTCTTTCTTGTTCTAATTTCATCCTTTCCTCATgaatttttctttgttcttctaCAATTTTCAATTGCTCTTCagcCAATTTAGCTTGAGCATCTGCAATTTTACGGTTATTTTCTTCCAATATTTTCTCCAGCTCTTCCCGTTTCGCTCTTTCTTCCTCCTAAATGGGAGACACGATGCAATGTTAGACCCAGTATGGGCTCATAAGGTTAGTTTCACCTATGCTTGCTCACAGAACTGTTTTGTGCCCTGACTCCTATAACAAAGGGTAGCATTAGAGCCCCCTGTGTTGcacaaactaaaacatacatttaaaaaaaaaaaaaaaaaaaaaaaaaaaacgaacaaaaaaaaaaaaaaacccggATATCTCGTCTATGTTCACGACACCCTCCCATTAATTCAACCACCAAAGCTAAACCCTCCCTGCTCATTAAGTACTTTAAGGAAAAAATGCATACTTGTATATCTACATACAAAGAAACATCACAATCAATAGTTGATGactataaagaaaaataactttctaGCAATTATTTCACTTTATCAACATAGCagaaaaatgaagagaaaaaaattgaatagtTTGGCTCACCAATTTATGTATACCTACGCATTCTTTACCTATACTCCATTTATCAGCATTAAAAGTTGCATATTTACTGTCTTGTCCAGtgtcctgcagagagagagagagtgctccTCGGCTGCCAAACGCGCCAGCTTCCTCTTTAAACTGATTTGTACTGTTAGCGTGGCAACACCTGCATCTGCAGCTCAGCCATTTACAAGAAACACCATACAAATGCAAGCTGAGCTGAGGACTGCAGATATTTATGGTAAGAAGGAACAAAAGTAATGTAATTCATCATTCCTAAGGCAAACAATTGATAAGAAACATACTGTTAGTtgtagtaaaaaaacaaaaaatagtgcAAGTTTAATCCAAGCTCTAAAGAATCCGCTGTCCTCAAACAGTCAATCGGAAGCAAAGTTACCGTTAAAATTCGGGttgaaaattgttttattacaaaaaaaggcATGAGCAAAATTATCCCAGGTGCACAACCTCcgagtttaattttttttttcatttaaatgcaagcCTGTGTTGTGAAGTGTCACACAAAAACGCCTGCCACTTTTAAGGTCTACCGTTTATGATCCTTGTGTTATTAGTAACGAGCTATTGACCAGTACTAGTCAATACCAGTGAGGAAGCTAgttctgaattaaatgtaaaaataatgtaggcttaactatttaaaagcactatttcATTAAAAGTATTATAGTCCAATATGAACTGTACAATGactgtaatattaaataaagtaaagtaaCAGTGTAATTATCTACAGCAGTCCCCATCTCTTGTCCAAAGCTCGGCAAAAGTCCCATATGAAACAATGCTGCAGTCAGAAGTCATAAACcagtgtattcattttttttttttaagccatttCCCCTGATTTCTAGCTGCTACTGTACACGAGCATCCTCACATTTAGAATGGAACcgaaaacctaaaaaaaaaacgcatgcaacttgactttaaaaaaacaagtttggTACAAAGGtatcatctttctttttaaaaccatCTACATTAAATCGCTTGAGGGGGAGGAAGAACAACTCCTTTGTGTGAAGcaagtattttaaaagaatgtatTTGTACTGCAAGATACTTGGTCTGCTTACTgaaatttaaatgtcattagtCGGGTACTTTTCCACTGAATGatttcatttctattttaattatggGAATTCTAAGCTTCTAACCTAATCCGTTTACTGAAAATAAACCGCTTAATACTAAAAGctacaaaaaatataacttCCTCTACAGATCTTTTAATgacagcaaacaaaataaaaatgatgataTAGTAAGGTAGGTAGTGTAACTGGGAGCTATAGACAAAAAAATGCTTGCCAAATTCTGTCTCAGTCACATGGCTCTGCTTCAGACAGAGGAAGGGCTAGACTGCTTTTTAACTACCAAGTAAGTGATACAGGAAAGCGGGGTCGGTAATTCAACTTAAACTTTCAAATACCCTTTTATtataacaaattacaaaaatagaaaagttttaaaaatatttaaaaaaaagggagCAGTGGGGTGGATTAAAGGATGATGTTGATAATTCTTTCTGCAGCCATTCCCAACGACCAAGCGTTACCTCTCTAGCTTTCTGCGCTGCGAGCTCAGCTTGCCGCTGTCGCTCCAGCTCCTCGAGCAACTGTTTCTCCATGATGCGCTTGGCCTCCTCCACCCTCCGGAGCACCTCACGCTCAATCTCATCTTTCCGCTTCTCAAGCTCCTCCTCCACCCTCTTGGCCACCAGCTCCTCCACCCTTCGTGCCGTCTCCTCCTCGATCAGCTTCTCCTCGATCTCCTGCTGCCGTATTTTCCGTTGCCTTTCCAATTCGgcttttttctcctcttcctcctttttttgtttctcatcaAGGCTGCTCCTTTTGCTAACCGTACGCCCGAAGATGTCGATTCTGTCAGGGGGAGAAGCGGCTCGCTCTcggtctctctccctctctctgcggGACGCGGCTGTGGTAGAGCGGGAGCGAGACCGAGACTCTCTACGGCGGTTTCTCTTCGCTTCTCGGGATTTTGATCGCTTCTTagctctctctttgtctctggaCCTAGACCTTGATCTGCTCCTTTTCTTGTTGTGCTTGCTGCTCTTTGAGTGCTTGGAGCGGGACGAGCTGCGACTACGGGAGCGACCCATGATCGCCGGCTCAAACCTTACGACCTTAATAATCAATCGCTGACTTTAAACGCTTTATATGTCGGATTGATCTTCGCAGTGGTACCCCCGAATGTGTTCAGTAAAAATTACAATGTCGTCTCTAATTTGTAAGTAAACCTTAATATTTTCACAACCCGATAACTCTATCCACCAAGCAAGATGGCGACTGTCTCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91622 True 4019 TUCP 0.39 5 34942011 34960447

Neighbor

gene id symbol gene type direction distance location
AMCG00014831 NA coding upstream 10151 34691085 ~ 34931860 (+)
AMCG00014827 NA coding upstream 1163763 33697523 ~ 33778248 (+)
AMCG00014822 NA coding upstream 2173032 32758965 ~ 32768979 (+)
AMCG00014821 LOC107738524 coding upstream 2185874 32734868 ~ 32756137 (+)
AMCG00014817 taf6 coding upstream 2278857 32653743 ~ 32663154 (+)
AMCG00014833 NA coding downstream 67410 35027857 ~ 35320982 (+)
AMCG00014835 NA coding downstream 410537 35370984 ~ 35382903 (+)
AMCG00014834 NA coding downstream 503554 35464001 ~ 35474369 (+)
AMCG00014837 NA coding downstream 590710 35551157 ~ 35551807 (+)
AMCG00014848 tmprss3,LOC107748899 coding downstream 1335269 36295716 ~ 36297723 (+)
G73327 LOC101154678 non-coding upstream 172053 34769583 ~ 34769958 (+)
G73326 NA non-coding upstream 188240 34753537 ~ 34753771 (+)
G73321 NA non-coding upstream 331599 34610180 ~ 34610412 (+)
G73304 NA non-coding upstream 491627 34450155 ~ 34450384 (+)
G73297 NA non-coding upstream 579063 34362707 ~ 34362948 (+)
G73354 NA non-coding downstream 118212 35078659 ~ 35078896 (+)
G73356 NA non-coding downstream 208502 35168949 ~ 35169206 (+)
G73374 NA non-coding downstream 293422 35253869 ~ 35256115 (+)
G73380 NA non-coding downstream 307197 35267644 ~ 35268081 (+)
G73427 NA non-coding downstream 511613 35472060 ~ 35476459 (+)
G73329 NA other upstream 161421 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 702611 34238934 ~ 34239400 (+)
G73244 NA other upstream 1575911 33364755 ~ 33366100 (+)
G73103 NA other upstream 2380522 32542510 ~ 32561489 (+)
AMCG00014811 NA other upstream 2979040 31939553 ~ 31962971 (+)
AMCG00014836 NA other downstream 430187 35390634 ~ 35412587 (+)
G73850 NA other downstream 2557661 37518108 ~ 37518406 (+)
G74114 NA other downstream 3471927 38432374 ~ 38432861 (+)
G74227 NA other downstream 3850246 38810693 ~ 38811128 (+)
G74348 NA other downstream 4375821 39336268 ~ 39475819 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G93365 NA non-coding NC_048565.1 CM023219.2 83342021 ~ 83342311 (+)
tiger barb (Puntius tetrazona) G69518 NA non-coding NC_056707.1 CM032076.1 11979781 ~ 12009922 (+)