G73548


Basic Information

Item Value
gene id G73548
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35340673 ~ 35423135 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91864
catttatttgtcagtgggcaaaatcagcaggggatcaaatacttttttccctcactgtattttctttgcacTATTACAGAtatgacaacactgcatcttttttgttattttgtcatttgtcagttttcattttctgcaaataaatgctataaatgacaatatttttatttggaatttgggagaaatgttgtcagtagtttatagaacccaaacgcatacctataaatagtaaaaccagacaaactgataattttgcagtggtctcaattttttccagagctgtatatacactgtGCAAAGGTCTTAGGCCACCAGAGAAAATTATGTTAAATGCCCTTTATCCGAGCaggaagtttttatttgtttgaaaaagcaatatataacaaatatataacacaaagaaacatgaatacaataaaaagtaataaaaacatcttgtgtttttaaaacaagtctGTATTTTGTGTGGCCTCCCTTAGAATGCAAAACTGAAGCAGTTTGCTTTGGTAGTCTATCGTGAAAGTTTTTCAAGTAGTCCGGTGGTAAAACCTTCGaagctttttgttcttttccttgTCCAAGTGGTAACACACAGCTTCAATTATGtcgaggtcagggctctgaggTGGTGAATCTAATACTGTGAGGTTTCCATCTGCAGACTTCCACTCCAGGTGAGTCTTAATCATGTTTGCAGAGTCATTATCTTGCTGAAAGATTAAGTTTTGCCAAACAGTCGTTTTCCTGAGGGTACTTCATGATGTATTATATATCTGTTTATATTCCTCAGTATACATAATTCCATCGATTTTAACCACATCCCCTACACCATTGGCTGAAATGCACCCCCAGACCTTGACAgagccaccaccatgcttcacagaagGCTGCAAACAAGTATCAGTGTACTTCTCGCCAACTCTTCTTCTGAAATACTGGCATCTTTTTGAACCAAAAGTTTCAAATTTGGACTCTTCGCTCCATAAGACTTTCTGCCACTGGTTGTCGCTCCAGCCATGTGGTCTTCTGTGTGCTGCAATTTCTTCTGCTTGTTGCCTTTCTGCAAGAATGTTTTTTTAGCTGAAACACACCCagagaataaaattaacacccgccaccTGCCAAATGCGGGTAGATTTAGCCCGTGGtgggtaaatctgtcaatcttACTAGCCACTTTGGcgggtagccaacaagtgtatGGGAACTCAGcttttagtttctgatagaGTATTTGTCggtatatttcaaaatacaaattaggcTACTTTGTTGACGTTGTAAtgttggtatgttagttgatttggcaaaccgcaatatcatgtttttttttttttgggacaGTTTtcggtccaggaggacatatttcatgaAGAGCAATATAAcgtggttaaggatgtggaaaaaaatgacttttaattacttttcatagtcataattactgactttttaatgacctggatcaaagtgtttcagaattataatatgacagaaaaggaaagaggaccgcaacaaacacattaatacatacacagccatttattttgtatttgctgtaacTTGAACGCACAGTTGTCTGAACGCAGATGGGCAGTCTGTGtggagtgtggtttggaaacatgaaaaagtcaatcgtttagtcaagtagattgtataaattagctagatagataggtcttatacatttttgtatttcactgttatgaccggaaaacattgccacaaggatgctaatgtaaggcattttcattgcagctcacattgctaaactggcaattgaatgaaaatgtataaaaaataaaaacatattggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91864 True 1813 lncRNA 0.37 2 35340673 35423135

Neighbor

gene id symbol gene type direction distance location
AMCG00014832 NA coding downstream 160034 35172869 ~ 35180639 (-)
AMCG00014830 arglu1,LOC106586866 coding downstream 380424 34942975 ~ 34960249 (-)
AMCG00014829 efnb2a coding downstream 409027 34910593 ~ 34931646 (-)
AMCG00014828 NA coding downstream 775471 34564486 ~ 34565202 (-)
AMCG00014826 NA coding downstream 1906291 33127678 ~ 33434382 (-)
AMCG00014838 LOC106600244 coding upstream 211852 35634987 ~ 35688097 (-)
AMCG00014841 NA coding upstream 319399 35742534 ~ 35767390 (-)
AMCG00014842 trappc10,LOC107726887 coding upstream 369213 35792348 ~ 35814438 (-)
AMCG00014840 agpat3,LOC102793782 coding upstream 555071 35978206 ~ 35986568 (-)
AMCG00014843 NA coding upstream 639484 36062619 ~ 36073308 (-)
G73385 NA non-coding downstream 65935 35273610 ~ 35274738 (-)
G73381 NA non-coding downstream 72556 35267752 ~ 35268117 (-)
G73378 NA non-coding downstream 81730 35257466 ~ 35258943 (-)
G73373 NA non-coding downstream 87939 35251894 ~ 35252734 (-)
G73366 NA non-coding downstream 106558 35233720 ~ 35234115 (-)
G73568 LOC107575789 non-coding upstream 11834 35434969 ~ 35842991 (-)
G73606 NA non-coding upstream 632861 36055996 ~ 36057458 (-)
G73609 NA non-coding upstream 770913 36194048 ~ 36194250 (-)
G73667 NA non-coding upstream 1051108 36474243 ~ 36475948 (-)
G73704 NA non-coding upstream 1222924 36646059 ~ 36652043 (-)
G73328 LOC101154678 other downstream 570694 34769583 ~ 34769979 (-)
AMCG00014825 NA other downstream 2221345 33070249 ~ 33119328 (-)
AMCG00014824 NA other downstream 2534378 32795005 ~ 32806295 (-)
G73127 NA other downstream 2721524 32597462 ~ 32619149 (-)
AMCG00014816 NA other downstream 2784728 32455306 ~ 32555945 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 157491 35580626 ~ 35608677 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other upstream 678223 36101358 ~ 36182351 (-)
G73612 NA other upstream 830639 36253774 ~ 36254187 (-)
AMCG00014845 NA other upstream 950016 36373151 ~ 36393493 (-)
G73833 NA other upstream 1901885 37325020 ~ 37325307 (-)

Expression


Co-expression Network