G117178


Basic Information

Item Value
gene id G117178
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14345090 ~ 14347741 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146792
CTGGGTGGCTGTGTGTTGCTTCCTGCCGTAGGGGCGTGGGGGGGCAGGGTGGTGTGTGTGCCATCCTGAGGATGGGACCAAAAGTCAGAGGGGTCCTCAGATGGGGCAGCATAGCCCTGCCTGCGCGCCTCGGGGCCGGGGAGGGGCTCCTGACCCAGCTCCCTACTCCAGGGGCCGGTCGAGCTCGGAGATGCTGGGTCCTTCGGCACAGTGGACCAGCGCTGCTGTGGGAACTGGTTCAACTCAGCCCTCGGGTGCTGGCTGAGAGTGTGGTCGGCAGTGGGGGTCTGGGGTCCTGGGTCCTGACTCTCCCACCCTGcccctcgtcctcctcctccttccttcACTCTGGTCTCCCAGAAGGCCTGCTGAGAGGAGGAGATGGGAGTGTCCGTGCGGGGGGTGGTCGGCGCTGCATTTCTCCACTGGCCCACGCCCTTCTGGATGTCAGCGACTGACAGGACCTCCTGGGGGGATGCCGGGGCTGGGGGGGCGGCGGGCCGGTACTCATCGCGGAATGAGTCGATGTCCAGAACCGGGGGCCTGTAGGGGTTCGGCTGGGATGGGCCGCCATCTAGGGACAGGGAGTCCAGGTCCAACACGCGGGGCCTCAGCTCCGCAGTGTCCAACGCAGTGCTCCTGCCGGACTGGGTGGTCCGGTCCTTAGTGCCCCAGCGCCGCGGCTTCACAGAGAAATCATCAAAGGCCACCTCTGTGGCAGGATCCGCCCCTACTCCTGGGTCAGCACTTCCCCTGCTGCCCACCCCAGGCCCGTCCTGGATCTGTCCCGTTAGGGCGAAGTAGGTGGCTCTGGGCCGAGTGGTGGCAGTGGTGGGATCGGCCAGctccctctgtcttagcctgtCCCTCTCTAGCTCTCTCAGCCTGTCCCTCTCTAGCTCTCTCAGCCTGTCCCTCTCTAGCTCTCTCAGCCTGTCCCTCTCTAGCTCCagttctctctgtctctccatctctctctgtctctccctctccatctctatttctctctgtctctgtctctctcgctctctctccagagctctcttttcattttctctctgtcgctccatctccatctctctcagtctttcttgctctctctccatctccttctctctctgcctctcttgctccacctctctctccctctgccacTCTGTGGAGGGGGTGTCTCCGTCTGTCTGTGCTGTCCACTTCGGCAGCGCCCCCACCCTGAGGTAGCGAGGCCCTGGAGCAGCTCTATCCCAATCACCCCTGTTTTTGTCCAGAACCTCAGGAAACTGTGGATTGCTCTCCTTCTCTAacttcctctgtctctccagctccctctgtctctccttctccctctgtctctccttctccctctgtctctccttctccctctccagctccctctgtctctccagctccctctccagctccctctgtctctccagctccctctgtctctccttctccctctccagctccctctgtctctccttctccctctccagctccctctgtctctccacttccctctgtctctccagctccctctccagctccttctgtctctcattctccctctccagctccctctgtctctcattctccctctccagctccctctgtctctccagctccctNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146792 True 1631 TUCP 0.62 3 14345090 14347741

Neighbor

gene id symbol gene type direction distance location
AMCG00018550 NA coding upstream 107141 14232722 ~ 14237949 (+)
AMCG00018552 LOC108412053,LOC101077666 coding upstream 112776 14230990 ~ 14232314 (+)
AMCG00018549 NA coding upstream 144746 14192138 ~ 14200344 (+)
AMCG00018539 NA coding upstream 183352 14159663 ~ 14161738 (+)
AMCG00018547 NA coding upstream 233180 14111704 ~ 14111910 (+)
AMCG00018558 NA coding downstream 13295 14361036 ~ 14367961 (+)
AMCG00018568 NA coding downstream 41285 14389026 ~ 14389346 (+)
AMCG00018570 NA coding downstream 44568 14392309 ~ 14393844 (+)
AMCG00018569 unc119.1,unc119b,LOC107712459,LOC107753165,LOC107550938,LOC107687994 coding downstream 56665 14404406 ~ 14406978 (+)
AMCG00018565 sppl3 coding downstream 72534 14420275 ~ 14431626 (+)
G117131 NA non-coding upstream 99772 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 100887 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 497998 13846890 ~ 13847092 (+)
G116975 NA non-coding upstream 505119 13839716 ~ 13839971 (+)
G116941 NA non-coding upstream 653723 13666023 ~ 13691367 (+)
G117197 NA non-coding downstream 90251 14437992 ~ 14439091 (+)
G117209 NA non-coding downstream 186222 14533963 ~ 14534200 (+)
G117353 NA non-coding downstream 388355 14736096 ~ 14738327 (+)
G117381 NA non-coding downstream 435765 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 438284 14786025 ~ 14786487 (+)
AMCG00018551 NA other upstream 102373 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 154013 14189003 ~ 14191077 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other upstream 199095 14141377 ~ 14145995 (+)
G117033 NA other upstream 295937 14046259 ~ 14049153 (+)
AMCG00018537 radil,LOC107725399,LOC107722964,LOC107590699,LOC107564693 other upstream 322284 13997909 ~ 14022806 (+)
AMCG00018567 NA other downstream 61217 14408958 ~ 14412279 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 426374 14774115 ~ 14777110 (+)
G117383 NA other downstream 438882 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 606823 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2720471 17068212 ~ 17069670 (+)

Expression


Co-expression Network