AMCG00019917


Basic Information

Item Value
gene id AMCG00019917
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2852209 ~ 2866964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019917
ATGACGtggcttttatttaaaatctttggGGCCCGGTTTTCAGGGTTTTATGGCCCGGAGTTTGTCTACGGCCAGACCAACCCGATCAGGGATGGGGGGGTTCCGGAAGCGCTGTCCCACTGGCGCTCTGTGGCCCCCGCCGCCCAGCCTGACTGGGGCACCCAGCAGATGGGCAAGGACTTCGTGTCTCTGAACCGTGAGGCGGTGAAGTCGGGGCTGGTGACAGCGCAGGAGCACAGCCAGTACCGCGCCACGCACCACATCCCGCCCTCCACCCCCATCTTCGATCTACTGGAGCACAAGTACGCCCAGCGCTGGCTGGAGGAGCAGCAGTCGGCACAGAGGGTCAGTCTGGAGCGCAGGCACAAGAAGGCTCAGCTGGGGAAGGTGTACGAGACACGGACGTCCCTCCTGCGCCAGAGGCAGCCCAGCCCGGAGTCGGCCCCCCTCTGGAAGCTGCCGCGGTTCCAACGGGTGGGGCCCCACTTGGACACGTTCCGGGACCCCGAGGCCCGCAGGAAGGCCGTGAGCGCCCACTTCTCCGACACGGTGGCACGGCGCGGACAGCTGGGCCAGGGCGTCTACAACACGGGCTAGACCGGCGCCGGAGGGACCGAGAGAACAGCACCAGGGAGCCCGGACTGAGCCGAGAGGAGCCATCACACACCTTTAATGACAACAGATTATTCCTGATCCTGTGACTGTGCTTATGaatgacaaatataattaaaaaaatatatattgtgagcTAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019917 True 755 mRNA 0.62 6 2852209 2866964

Neighbor

gene id symbol gene type direction distance location
AMCG00019916 gsna,LOC107708352,LOC107595697,LOC107556937,LOC107686887 coding upstream 42208 2790773 ~ 2810001 (+)
AMCG00019910 NA coding upstream 84146 2742701 ~ 2768063 (+)
AMCG00019907 NA coding upstream 182196 2666705 ~ 2670013 (+)
AMCG00019904 exosc2,exos2,LOC106566956 coding upstream 189049 2658045 ~ 2663160 (+)
AMCG00019905 prdm12b,LOC107688643,LOC105030201,LOC106587007,LOC107731029,LOC108423597 coding upstream 196176 2650937 ~ 2656033 (+)
AMCG00019915 barhl1b,LOC107708351,LOC107595696,LOC105902520,LOC107556939,LOC100712077 coding downstream 2741 2869705 ~ 2876818 (+)
AMCG00019921 NA coding downstream 43280 2910244 ~ 2918881 (+)
AMCG00019926 NA coding downstream 128900 2995864 ~ 3004905 (+)
AMCG00019925 NA coding downstream 149270 3016234 ~ 3020777 (+)
AMCG00019924 NA coding downstream 157425 3024389 ~ 3031475 (+)
G59638 NA non-coding upstream 25572 2825591 ~ 2826637 (+)
G59625 NA non-coding upstream 63970 2787910 ~ 2788239 (+)
G59578 NA non-coding upstream 135294 2715528 ~ 2716915 (+)
G59557 NA non-coding upstream 218079 2583694 ~ 2634130 (+)
G59467 NA non-coding upstream 671140 2180603 ~ 2181069 (+)
G59646 NA non-coding downstream 16750 2883714 ~ 2885416 (+)
G59700 NA non-coding downstream 164914 3031878 ~ 3034341 (+)
G59714 NA non-coding downstream 240836 3107800 ~ 3109882 (+)
G59715 NA non-coding downstream 249554 3116518 ~ 3116819 (+)
G59716 NA non-coding downstream 250250 3117214 ~ 3117452 (+)
AMCG00019884 NA other upstream 1743213 1074816 ~ 1108996 (+)
G59305 NA other upstream 2406679 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 95544 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 374344 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 1956849 4823813 ~ 4856929 (+)
G60137 NA other downstream 2488808 5355772 ~ 5361863 (+)
G60132 NA other downstream 2491500 5358464 ~ 5359365 (+)

Expression


Co-expression Network