AMCG00019973



Basic Information


Item Value
gene id AMCG00019973
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4989540 ~ 4992117 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00019973
ATGGAGGGCCGGCTGCTCTGCCTGCTCTTACTCCTCTGTCCTCACATCGGCTCCTGCGCCTCCGCAGACAAGAGGACGGGCTGCCTTCGAGTGAACCCCTGCAAGTGCATCCTGAAGGACGGCTCCGGCGTCATTAACCTGGCGGCGCTGGGCGACTCGGCCGGCTTCCTGCAGCGGGGCGCGCCGGTGGCGGCGGTGGCGGCGGCGGGGCCCGGGGCGCCTGCGGGGGCCGCGGTGCTGCTGTCCTTCAGCCCGTGTGTGCCCTTCTCCGAGCCCGCGGAGCTCTCCGCCGCACAGTGCCTGGGAGTGGCGGCCTGTGTGGAGGTCAGACAGCACACAGGCAGCGGGCTGGTGAGTTATTACCTGAACTACGGCAGACACGAAGGGAATGAATTCAACTACAACAACCACAGCCAGACCCTCTCCGTCACATACCCAGCCCGGCCCCCCCAGCCCCAGTACACCGTGGCGCACTACCACTGCAGCCCCAACCGCTCGGTGTCCGTCTCCCAGCCCCTGGAGCTGGACGGGGCCCTGGAGATCTCTGTGCACAGCCCCTGCGCCTGTCCCAACACCTGCTCCCTGGAGGACGTGGGCCCTGGCACCATCTTCCTCATCATCTTCTGCCTCGCGGGCACGGCTTACTTCATACTGGGCTCCTGCGCTCTGCGGCCCATCAGGACTGCCAGCGGGGTACAAATCGTGCCAGAGGAGAGCCTTTGGTGCCAGTTGTGCTCGCTGTTCACCGTGAAGAAAGGAAGACGGCACAGGAGGCGGCGGTCCAAGCATGAGGAGCCCCTCTGAGGAGACGTGCACAGGCGCCGTCCTGCCCCGTGGAGGGCTGGGAAGACATGCCCATACGCTGAAGTCAACATTGACTACATTCCTTAACAGGAATAAAAGTGAAGACTTAACCTACTTATCTCACACTGCGGGGTATCGGAggcaatttcagtttttaaaagtaatCTCATTCTGATGGATTGAAAGCATTTCCAACTCATCTGTCTTGTGAATCAGAGACATTAGAGAGTTATGCAACATCTGAAGTTAGAAAACCATAAATACCGACTTCACTGACAAACTCTGttgttactttttgttttattttctgtagggGTTAGAGGGGTCTATATTTTGGGCgtttattttagtatatatagttgatttgtaattttatcctgttgtgtattatgttgtCATGCCAATAATATCTTTCAATATCTGtgccaaaaataaacatttctagACAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00019973 True 1253 mRNA 0.56 4 4989540 4992117

Neighbor


gene id symbol gene type direction distance location
AMCG00019969 NA coding upstream 93050 4889778 ~ 4896490 (+)
AMCG00019966 uck1,LOC102793675 coding upstream 102537 4861095 ~ 4887003 (+)
AMCG00019965 LOC107672533,LOC107731020,LOC107552623,LOC107740807,LOC107587726 coding upstream 193733 4795433 ~ 4795807 (+)
AMCG00019962 NA coding upstream 220877 4768115 ~ 4768663 (+)
AMCG00019963 NA coding upstream 311655 4658354 ~ 4677885 (+)
AMCG00019978 slc25a25,LOC106570619 coding downstream 99317 5091434 ~ 5103902 (+)
AMCG00019981 NA coding downstream 113272 5105389 ~ 5115802 (+)
AMCG00019980 NA coding downstream 126043 5118160 ~ 5132090 (+)
AMCG00019977 set,LOC105014167,LOC102777863,LOC107083999,LOC100696975 coding downstream 161027 5153144 ~ 5157266 (+)
AMCG00019979 NA coding downstream 169842 5161959 ~ 5166851 (+)
G59959 NA non-coding upstream 189257 4796574 ~ 4800283 (+)
G59956 NA non-coding upstream 230893 4758285 ~ 4758647 (+)
G59955 NA non-coding upstream 236644 4750465 ~ 4752896 (+)
G59936 NA non-coding upstream 254865 4707564 ~ 4734675 (+)
G59857 LOC100136012 non-coding upstream 949620 4039515 ~ 4039920 (+)
G60038 NA non-coding downstream 521 4992638 ~ 5028847 (+)
G60072 NA non-coding downstream 182319 5174436 ~ 5175779 (+)
G60201 NA non-coding downstream 704510 5696627 ~ 5696853 (+)
G60202 NA non-coding downstream 708384 5700501 ~ 5700840 (+)
G60215 NA non-coding downstream 800352 5792469 ~ 5792880 (+)
AMCG00019967 prrc2b other upstream 132611 4823813 ~ 4856929 (+)
AMCG00019934 NA other upstream 1738133 3241308 ~ 3251407 (+)
AMCG00019920 NA other upstream 2019945 2962508 ~ 2969595 (+)
AMCG00019884 NA other upstream 3880544 1074816 ~ 1108996 (+)
G59305 NA other upstream 4544010 441598 ~ 445530 (+)
G60137 NA other downstream 363655 5355772 ~ 5361863 (+)
G60132 NA other downstream 366347 5358464 ~ 5359365 (+)
AMCG00020001 NA other downstream 1114877 6106994 ~ 6114196 (+)
AMCG00020000 NA other downstream 1190582 6182699 ~ 6187889 (+)
AMCG00020052 NA other downstream 2874483 7866600 ~ 7884548 (+)

Expression



Co-expression Network