Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020089 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 9526351 ~ 9527538 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020089 | True | 1188 | mRNA | 0.48 | 1 | 9526351 | 9527538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020091 | NA | coding | upstream | 133428 | 9386073 ~ 9392923 (+) |
| AMCG00020090 | NA | coding | upstream | 141975 | 9349079 ~ 9384376 (+) |
| AMCG00020085 | ubac1 | coding | upstream | 187772 | 9326919 ~ 9338579 (+) |
| AMCG00020086 | NA | coding | upstream | 225155 | 9271524 ~ 9301196 (+) |
| AMCG00020075 | pmpca,LOC107731046,LOC107672556 | coding | upstream | 368637 | 9144551 ~ 9157714 (+) |
| AMCG00020092 | NA | coding | downstream | 8576 | 9536114 ~ 9542291 (+) |
| AMCG00020095 | NA | coding | downstream | 97551 | 9625089 ~ 9625634 (+) |
| AMCG00020099 | LOC105014073 | coding | downstream | 163700 | 9691238 ~ 9732050 (+) |
| AMCG00020104 | NA | coding | downstream | 214219 | 9741757 ~ 9779949 (+) |
| AMCG00020101 | NA | coding | downstream | 282452 | 9809990 ~ 9815939 (+) |
| G60888 | NA | non-coding | upstream | 102792 | 9423337 ~ 9423559 (+) |
| G60886 | NA | non-coding | upstream | 118334 | 9407657 ~ 9408017 (+) |
| G60836 | NA | non-coding | upstream | 276537 | 9249600 ~ 9249814 (+) |
| G60753 | NA | non-coding | upstream | 639895 | 8886187 ~ 8886456 (+) |
| G60729 | NA | non-coding | upstream | 716482 | 8807002 ~ 8809869 (+) |
| G61064 | LOC103376870 | non-coding | downstream | 749928 | 10277466 ~ 10346391 (+) |
| G61095 | NA | non-coding | downstream | 978861 | 10506399 ~ 10507213 (+) |
| G61153 | LOC103469607,LOC104930867,LOC103356464 | non-coding | downstream | 1254228 | 10781766 ~ 10783898 (+) |
| G61205 | NA | non-coding | downstream | 1480878 | 11008416 ~ 11011745 (+) |
| G61249 | mvb12b,LOC104934585,LOC105922272,LOC103362447 | non-coding | downstream | 1966088 | 11493626 ~ 11521381 (+) |
| AMCG00020053 | NA | other | upstream | 1475204 | 8044275 ~ 8051147 (+) |
| AMCG00020052 | NA | other | upstream | 1641803 | 7866600 ~ 7884548 (+) |
| AMCG00020000 | NA | other | upstream | 3338462 | 6182699 ~ 6187889 (+) |
| AMCG00020001 | NA | other | upstream | 3412155 | 6106994 ~ 6114196 (+) |
| G60132 | NA | other | upstream | 4166986 | 5358464 ~ 5359365 (+) |
| AMCG00020105 | rpl28,rl28 | other | downstream | 256579 | 9784117 ~ 9788052 (+) |
| AMCG00020122 | urm1 | other | downstream | 952996 | 10480534 ~ 10499506 (+) |
| AMCG00020129 | tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 | other | downstream | 1210964 | 10738502 ~ 10755375 (+) |
| AMCG00020134 | rabl6 | other | downstream | 1418054 | 10945592 ~ 10969598 (+) |
| AMCG00020143 | pbx3,LOC107669256,LOC108434408 | other | downstream | 1746486 | 11274024 ~ 11300032 (+) |
