AMCG00020130


Basic Information

Item Value
gene id AMCG00020130
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10696538 ~ 10697008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020130
ATGTTTCTCCAATCTTCTCTTCCTGTGCCTCTCCCCCTCCTGTCCCTCTTTCTGTCTTGCTTTGCTGGGCAGTACTACTGCTGTAAGAAGGAGGAGtcagaggaggatgaggaggagccGGACTTTGCCATGCACTCCCATCTCCCGCCTGTGCACTGCAACCACAATGTAGCGGCCGCGGCGGCAGCAGCCACCGCCAACGGTCCTGCTATCTATTCCCCTCCCCTGGCGAGAAAGCTCGCCCGCTCCCGAACTTACTGCCCCAACTGCACGCACTACGAGCTGCCCTTCTACCTGCAGCACCCAGAGGGGCTTCGTAACGGAGGTGAGCGCATCAGCTACAGGACTGTCCAGCAGGAGGACTTGGATCTGCCCATGGACCTGGCCAGCTTCCACAAGCTCAACCTCACACGTTCTGTCACTATGAAAGAGGTCTTCACACGAAGCAGGAGCATCAGCACTGATGTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020130 True 471 mRNA 0.58 1 10696538 10697008

Neighbor

gene id symbol gene type direction distance location
AMCG00020127 sardh,LOC107713264 coding upstream 68401 10607803 ~ 10628137 (+)
AMCG00020128 sardh coding upstream 99842 10559670 ~ 10596696 (+)
AMCG00020131 NA coding upstream 152174 10541777 ~ 10544364 (+)
AMCG00020120 NA coding upstream 158520 10532713 ~ 10538018 (+)
AMCG00020121 cercam coding upstream 165275 10520781 ~ 10531263 (+)
AMCG00020126 LOC107597661 coding downstream 59012 10756020 ~ 10771515 (+)
AMCG00020138 NA coding downstream 307925 11004933 ~ 11008268 (+)
AMCG00020137 gapvd1 coding downstream 330653 11027661 ~ 11063288 (+)
AMCG00020142 pbx3b,LOC107669256,LOC107550583,LOC107555108 coding downstream 506841 11203849 ~ 11205492 (+)
AMCG00020145 mvb12ba,LOC102781577,LOC107654329 coding downstream 775524 11472532 ~ 11494336 (+)
G61095 NA non-coding upstream 189325 10506399 ~ 10507213 (+)
G61064 LOC103376870 non-coding upstream 350147 10277466 ~ 10346391 (+)
G60888 NA non-coding upstream 1272979 9423337 ~ 9423559 (+)
G60886 NA non-coding upstream 1288521 9407657 ~ 9408017 (+)
G60836 NA non-coding upstream 1446724 9249600 ~ 9249814 (+)
G61153 LOC103469607,LOC104930867,LOC103356464 non-coding downstream 84758 10781766 ~ 10783898 (+)
G61205 NA non-coding downstream 311408 11008416 ~ 11011745 (+)
G61249 mvb12b,LOC104934585,LOC105922272,LOC103362447 non-coding downstream 796618 11493626 ~ 11521381 (+)
G61329 NA non-coding downstream 1304692 12001700 ~ 12003127 (+)
G61331 NA non-coding downstream 1311784 12008792 ~ 12009100 (+)
AMCG00020122 urm1 other upstream 197032 10480534 ~ 10499506 (+)
AMCG00020105 rpl28,rl28 other upstream 908486 9784117 ~ 9788052 (+)
AMCG00020053 NA other upstream 2645391 8044275 ~ 8051147 (+)
AMCG00020052 NA other upstream 2811990 7866600 ~ 7884548 (+)
AMCG00020000 NA other upstream 4508649 6182699 ~ 6187889 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other downstream 41494 10738502 ~ 10755375 (+)
AMCG00020134 rabl6 other downstream 248584 10945592 ~ 10969598 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other downstream 577016 11274024 ~ 11300032 (+)
AMCG00020171 rpl12 other downstream 1711954 12408962 ~ 12414951 (+)
AMCG00020177 NA other downstream 1822756 12519764 ~ 12542261 (+)

Expression


Co-expression Network