AMCG00020149


Basic Information

Item Value
gene id AMCG00020149
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 11713547 ~ 11715100 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020149
ATGGACGACAGCAACAACTTTATAGAATTCGACGTGCCAGAGTTCAGCAACACTGTCCTGAGTCAACTGAACGAGCTGCGCCTGCAGGGGAAGCTATGCGACATCATCGTGCACATCCAGGGCCAGCCCTTCCGGGCCCACAAGGCTGTGCTAGCGGCTAGCTCCCCGTACTTCCGCGACCACTCAGCCCTCAGCACCATGAGCGGCCTTTCCATCTCGGTCATCAAAAACCCAGAGGTGTTTGAGCAGCTGCTGGCCTTCTGCTACACGGGCCACATGTCTCTGCAGCTGAAGGACGTCATCAGCTTCCTCACGGCCGCCAGCTTCCTGCAGATGCAGGCCGTCATTGACAAGTGCACCCAGATCCTGGAGGGCATCCACTCCAAGATCAGCCTCCCCGGCCACCCTGATGCCAAGGACGGCTCCCAGGCCAGCCGCAACGGGGTGAAGGACCGCAACCCGTTTGTCAACCCCCTGGAGATCTCTCCCCCCTGCTTCTCTCGCCAGGCCCTGGTGTCCGTGGGTGGGGCCGGAGACGCCAAGCAGGACGCGGGTAGGGGCTTGACGAGACACCGGCTGCAGGAGGAGGGGCAGTCGGACAGAGGCAGCAGTGGCAGTGTGTCGGAGCACGAGACGGCGCTGGAGGGTGAACAGGAGCAGGTGGACCTGATCGGCAGGGATGGCCAGGTGACAGACATCAAGGTGAAGCTGGAGAAGTCGGACCGGCCCAGCTGCTCGGACAGCTCCTCGGCGGGGGATGACGGCTACCACACGGAGATGATCGACGGGGAGCAGGTGCTGGCGGTCAGCGTTGGCTCCTACGGTCCTGTGCTGCAGCACACCGGCTACACCTACCCCCCGGTGGTGTCGCAGTCCTCGTCCAGCTTCGTCAGCCTCAGTAACTCCAGTCCCTCGCGCTCCATGCTCAGTAGCTTCAGGGGAGGCCGGGCCAGACCCAAGCGGCCTGTACCGGTGCCAGCGGAGGTGCCTGCTGTGCTGAAGCCAGCCCAGGAGGACGGCGAGGCGCCCTTCCACTGCGAGATCTGCGGCAAGTGTTTCCCCTTCCAGGGCACCCTCAACCAGCACCTGCGCAAGAAACACATGGGGGTCACGGACGTGCGCAACCACATGGACTCCCCCGACAGAGCCGAGGGCACCTTGGAGCCCAAGGACCCCGACGACCCCCTGGCGGTGGAGGCGAGCATGGAGTACAGCACGCAGTACGGCGAGGAGAACCCCGGCCAGGACGAACACGACGACATCGCCAAGGGCAGCCCCGAGGGAGCCCCGCCGGCCAGATGTGATTTTTAG

Function

GO: NA

KEGG:

id description
K10508 ZBTB34; zinc finger and BTB domain-containing protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020149 True 1311 mRNA 0.64 2 11713547 11715100

Neighbor

gene id symbol gene type direction distance location
AMCG00020147 NA coding upstream 13709 11673710 ~ 11699838 (+)
AMCG00020148 lmx1b,LOC108236478 coding upstream 86412 11617505 ~ 11627135 (+)
AMCG00020146 NA coding upstream 159099 11554203 ~ 11554448 (+)
AMCG00020144 mvb12b,LOC101173957,LOC104934585,LOC105922272,LOC103362447 coding upstream 192158 11506590 ~ 11521389 (+)
AMCG00020145 mvb12ba,LOC102781577,LOC107654329 coding upstream 219211 11472532 ~ 11494336 (+)
AMCG00020150 ralgps1,LOC108412534,LOC107723240 coding downstream 53817 11768917 ~ 11811842 (+)
AMCG00020152 ralgps1,LOC105905312,LOC108412534,LOC107727327 coding downstream 164982 11880082 ~ 11923630 (+)
AMCG00020154 NA coding downstream 228179 11943279 ~ 11944400 (+)
AMCG00020156 NA coding downstream 277092 11992192 ~ 11995111 (+)
AMCG00020157 NA coding downstream 442441 12157541 ~ 12172006 (+)
G61249 mvb12b,LOC104934585,LOC105922272,LOC103362447 non-coding upstream 192166 11493626 ~ 11521381 (+)
G61205 NA non-coding upstream 701802 11008416 ~ 11011745 (+)
G61153 LOC103469607,LOC104930867,LOC103356464 non-coding upstream 929649 10781766 ~ 10783898 (+)
G61095 NA non-coding upstream 1206334 10506399 ~ 10507213 (+)
G61064 LOC103376870 non-coding upstream 1367156 10277466 ~ 10346391 (+)
G61329 NA non-coding downstream 286600 12001700 ~ 12003127 (+)
G61331 NA non-coding downstream 293692 12008792 ~ 12009100 (+)
G61332 NA non-coding downstream 296561 12011661 ~ 12011876 (+)
G61333 NA non-coding downstream 296860 12011960 ~ 12012407 (+)
G61335 NA non-coding downstream 300598 12015698 ~ 12016151 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 413515 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 743949 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 958172 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 1214041 10480534 ~ 10499506 (+)
AMCG00020105 rpl28,rl28 other upstream 1925495 9784117 ~ 9788052 (+)
AMCG00020171 rpl12 other downstream 693862 12408962 ~ 12414951 (+)
AMCG00020177 NA other downstream 804664 12519764 ~ 12542261 (+)
G61491 NA other downstream 900692 12615792 ~ 12619817 (+)
G61675 NA other downstream 1634577 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 2071914 13787014 ~ 13792944 (+)

Expression


Co-expression Network