AMCG00020165


Basic Information

Item Value
gene id AMCG00020165
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12200128 ~ 12202687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020165
ATGAATCCATCCCCTGTTAACCGCCACGTTATTCAGTACCTGTTCCCCGTCAGCTCAGCAGCCGataaaccaaacaaaaactcCCCGAAAGATGCTCGCAGTGTCGCAGAGAACAGCGacccccagcccccagcccccagcccccagccccccagcccccagccccctgTGTCCATCTCAAACAGCGGCATTGCACGGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020165 True 201 mRNA 0.61 2 12200128 12202687

Neighbor

gene id symbol gene type direction distance location
AMCG00020163 ptpa,LOC102782294 coding upstream 1481 12185834 ~ 12198647 (+)
AMCG00020157 NA coding upstream 28122 12157541 ~ 12172006 (+)
AMCG00020156 NA coding upstream 205017 11992192 ~ 11995111 (+)
AMCG00020154 NA coding upstream 255728 11943279 ~ 11944400 (+)
AMCG00020152 ralgps1,LOC105905312,LOC108412534,LOC107727327 coding upstream 276498 11880082 ~ 11923630 (+)
AMCG00020166 NA coding downstream 166086 12368773 ~ 12371712 (+)
AMCG00020172 NA coding downstream 179126 12381813 ~ 12395040 (+)
AMCG00020170 NA coding downstream 225729 12428416 ~ 12431152 (+)
AMCG00020173 lmo41,LOC105911081,LOC108260376,LOC106585438 coding downstream 246081 12448768 ~ 12452785 (+)
AMCG00020169 NA coding downstream 277217 12479904 ~ 12481905 (+)
G61338 NA non-coding upstream 70557 12126842 ~ 12129571 (+)
G61336 NA non-coding upstream 183381 12016496 ~ 12016747 (+)
G61335 NA non-coding upstream 183977 12015698 ~ 12016151 (+)
G61333 NA non-coding upstream 187721 12011960 ~ 12012407 (+)
G61332 NA non-coding upstream 188252 12011661 ~ 12011876 (+)
G61434 NA non-coding downstream 212312 12414999 ~ 12468293 (+)
G61435 NA non-coding downstream 215123 12417810 ~ 12506599 (+)
G61440 NA non-coding downstream 281690 12484377 ~ 12504599 (+)
G61460 NA non-coding downstream 379574 12582261 ~ 12585656 (+)
G61568 NA non-coding downstream 627285 12829972 ~ 12852064 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 900096 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1230530 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 1444753 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 1700622 10480534 ~ 10499506 (+)
AMCG00020105 rpl28,rl28 other upstream 2412076 9784117 ~ 9788052 (+)
AMCG00020171 rpl12 other downstream 206275 12408962 ~ 12414951 (+)
AMCG00020177 NA other downstream 317077 12519764 ~ 12542261 (+)
G61491 NA other downstream 413105 12615792 ~ 12619817 (+)
G61675 NA other downstream 1146990 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 1584327 13787014 ~ 13792944 (+)

Expression


Co-expression Network