Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020166 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 12368773 ~ 12371712 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0035572 | N-terminal peptidyl-serine dimethylation | biological_process |
| GO:0035573 | N-terminal peptidyl-serine trimethylation | biological_process |
| GO:0007051 | spindle organization | biological_process |
| GO:0007059 | chromosome segregation | biological_process |
| GO:0018016 | N-terminal peptidyl-proline dimethylation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0008276 | protein methyltransferase activity | molecular_function |
| id | description |
|---|---|
| K16219 | NTMT1, METTL11A, NTM1; protein N-terminal methyltransferase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020166 | True | 1300 | mRNA | 0.57 | 4 | 12368773 | 12371712 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020165 | NA | coding | upstream | 166086 | 12200128 ~ 12202687 (+) |
| AMCG00020163 | ptpa,LOC102782294 | coding | upstream | 170126 | 12185834 ~ 12198647 (+) |
| AMCG00020157 | NA | coding | upstream | 196767 | 12157541 ~ 12172006 (+) |
| AMCG00020156 | NA | coding | upstream | 373662 | 11992192 ~ 11995111 (+) |
| AMCG00020154 | NA | coding | upstream | 424373 | 11943279 ~ 11944400 (+) |
| AMCG00020172 | NA | coding | downstream | 10101 | 12381813 ~ 12395040 (+) |
| AMCG00020170 | NA | coding | downstream | 56704 | 12428416 ~ 12431152 (+) |
| AMCG00020173 | lmo41,LOC105911081,LOC108260376,LOC106585438 | coding | downstream | 77056 | 12448768 ~ 12452785 (+) |
| AMCG00020169 | NA | coding | downstream | 108192 | 12479904 ~ 12481905 (+) |
| AMCG00020176 | NA | coding | downstream | 191448 | 12563160 ~ 12564443 (+) |
| G61338 | NA | non-coding | upstream | 239202 | 12126842 ~ 12129571 (+) |
| G61336 | NA | non-coding | upstream | 352026 | 12016496 ~ 12016747 (+) |
| G61335 | NA | non-coding | upstream | 352622 | 12015698 ~ 12016151 (+) |
| G61333 | NA | non-coding | upstream | 356366 | 12011960 ~ 12012407 (+) |
| G61332 | NA | non-coding | upstream | 356897 | 12011661 ~ 12011876 (+) |
| G61434 | NA | non-coding | downstream | 43287 | 12414999 ~ 12468293 (+) |
| G61435 | NA | non-coding | downstream | 46098 | 12417810 ~ 12506599 (+) |
| G61440 | NA | non-coding | downstream | 112665 | 12484377 ~ 12504599 (+) |
| G61460 | NA | non-coding | downstream | 210549 | 12582261 ~ 12585656 (+) |
| G61568 | NA | non-coding | downstream | 458260 | 12829972 ~ 12852064 (+) |
| AMCG00020143 | pbx3,LOC107669256,LOC108434408 | other | upstream | 1068741 | 11274024 ~ 11300032 (+) |
| AMCG00020134 | rabl6 | other | upstream | 1399175 | 10945592 ~ 10969598 (+) |
| AMCG00020129 | tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 | other | upstream | 1613398 | 10738502 ~ 10755375 (+) |
| AMCG00020122 | urm1 | other | upstream | 1869267 | 10480534 ~ 10499506 (+) |
| AMCG00020105 | rpl28,rl28 | other | upstream | 2580721 | 9784117 ~ 9788052 (+) |
| AMCG00020171 | rpl12 | other | downstream | 37250 | 12408962 ~ 12414951 (+) |
| AMCG00020177 | NA | other | downstream | 148052 | 12519764 ~ 12542261 (+) |
| G61491 | NA | other | downstream | 244080 | 12615792 ~ 12619817 (+) |
| G61675 | NA | other | downstream | 977965 | 13349677 ~ 13350712 (+) |
| AMCG00020245 | LOC107746475,LOC107567702,LOC107595988 | other | downstream | 1415302 | 13787014 ~ 13792944 (+) |
