AMCG00020169


Basic Information

Item Value
gene id AMCG00020169
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12479904 ~ 12481905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020169
CCACAGTCCACTGAGCTTAGACTACTGTGGGTCtgcacagcccagcccagcccagcagaTTCAAGGCAGGAGGGGAGGCCACGCTGCTGCCCAGCTCCTATTCACTAGAGGCAAGGGGACAGAGACAGTGACAAAACCAGAGTGAATACAGGAGAAAAGGAGGACAGCGAGACACTGAGTCAGTGGGacgggaagagagggagagagcgagacacAGTGGGACAGTGAGATTGTGACTGGGCACCTCCAGTCACCAGCAACACTCAATCAAGTTTCCATGTGGgagagcacagagagaggaggaatagcagagagaggaggaggaggcggtaCAGGCCTTCAGCACCCAGACCCGCTGGTGCGCGAGGCCTACCTGTTGTCCTACGACTACATCGGGTACGTGACGGGACTACAGCCGAACTCCCGGCGCCCCCCCTCACCCGCCGCCGCCGCCCTGCGCCACGCTGGCGATGACCTGCAGCTCAAGTTCCCGATCTTCTTCCGCCGATGGCCACGTGTGTTCCAGGGCGTCACCACAGAGACCGCCTGCCCCATGCTGCTACAGCTGTTGGATGAGCACTTCCAGCCCGCAGATGCTGGCGCCTCCACCAGGAGGAGGGAGCTGGCCTGGAGCGCCGTGCTGTCCGTGTACGTGCTGGCCGGACAGATGGCTCTTCACTGCCAGGAGAGGGGCATGCTGGGAGTGCTGCCTGAGCTGCAAGAGCGCGTGGGTCAGTACATGGAGGCCGTCATCTGCCCCCAGATCCGGGACAAGGGCGGCTGGTCGGGCTTTGTGTCGCGCTACAGCAGGAAGCAGGACTTGGAGGGGCAGGTGAGAAGAGTGTGCTGCTGGACTCTGCTGTTCCTGGCCTCCAGCATCCTCTCCTACTTCCTGTGGAAACGGCAACGCACGTGAAGCCCCCCCCATGTCATGGCTCGGCTCCCCCCactcccttcctctcccctgAAGGATCTTGGCATCTCCTACAGTGACACACATGGCCATGCATTTAAGACTTTGGGGGGGTTAGTCTATCCTAACCCCTTCACTGTAGACGTCCCTGTCACTGCACTTTGAAACAACGGGCAACAGTCACAGCAGAAGTCTTTAGTCTTCTCACATCCATTGTGTCTCGAGTGCATGCTGAGTGCTGCGTTTGATCAATCTCCTCACACACCTGTGTTCCAGAGGCACTTCCACACAAGAGCTGTAAAACGTAGTGATGATGTACtgattctgtttctttctgtataaCCCTATGAGCAGGTCTGGAAAGAAGGGAGTTCAGTGTTcgataatgtaatgtttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020169 True 1312 mRNA 0.58 3 12479904 12481905

Neighbor

gene id symbol gene type direction distance location
AMCG00020173 lmo41,LOC105911081,LOC108260376,LOC106585438 coding upstream 27119 12448768 ~ 12452785 (+)
AMCG00020170 NA coding upstream 48752 12428416 ~ 12431152 (+)
AMCG00020172 NA coding upstream 84864 12381813 ~ 12395040 (+)
AMCG00020166 NA coding upstream 108192 12368773 ~ 12371712 (+)
AMCG00020165 NA coding upstream 277217 12200128 ~ 12202687 (+)
AMCG00020176 NA coding downstream 81255 12563160 ~ 12564443 (+)
AMCG00020182 NA coding downstream 169254 12651159 ~ 12651764 (+)
AMCG00020181 NA coding downstream 170311 12652216 ~ 12654743 (+)
AMCG00020187 NA coding downstream 183003 12664908 ~ 12690345 (+)
AMCG00020191 nrarpa,nrarp coding downstream 252970 12734875 ~ 12735213 (+)
G61434 NA non-coding upstream 11611 12414999 ~ 12468293 (+)
G61338 NA non-coding upstream 350333 12126842 ~ 12129571 (+)
G61336 NA non-coding upstream 463157 12016496 ~ 12016747 (+)
G61335 NA non-coding upstream 463753 12015698 ~ 12016151 (+)
G61333 NA non-coding upstream 467497 12011960 ~ 12012407 (+)
G61440 NA non-coding downstream 2472 12484377 ~ 12504599 (+)
G61460 NA non-coding downstream 100356 12582261 ~ 12585656 (+)
G61568 NA non-coding downstream 348067 12829972 ~ 12852064 (+)
G61588 NA non-coding downstream 515945 12997850 ~ 12998227 (+)
G61650 NA non-coding downstream 855091 13336996 ~ 13338088 (+)
AMCG00020171 rpl12 other upstream 64953 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 1179872 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1510306 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 1724529 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 1980398 10480534 ~ 10499506 (+)
AMCG00020177 NA other downstream 37859 12519764 ~ 12542261 (+)
G61491 NA other downstream 133887 12615792 ~ 12619817 (+)
G61675 NA other downstream 867772 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 1305109 13787014 ~ 13792944 (+)
G61894 NA other downstream 1351265 13833170 ~ 13834832 (+)

Expression


Co-expression Network