AMCG00020206


Basic Information

Item Value
gene id AMCG00020206
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13248757 ~ 13255291 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020206
atgaacACACAAGGTGGGAGACTCGGCCTGGAGGTCAGGATTGCTGGACGGGAGAAAGTTGAGAGCCACCCCGGAGCGCCGTGCATTGCAGGACGAGCCCCTCCAGCTGCCCCATGCGCGGTCGATTTCGTCTCTGGGAAAAACGAGAAGATAAGAATAACGATGATGCCAATGCATTTCGAGGATTCCAGTAGCGTGACGCTGCTGTTTGATTTTTGGAATGTCCACGGGCCTGGAGGCATGCTGCTGTCAGTGTTCGTGGTGCTGCTCTTCACAGTGCTGTACGAGCTGCTGAAGGTGTGGAAGCTGTGGTTGATGGAGAGGTCCCTGGCTAGCAACCCGGCCTCGCCCCAGGGCAGCAACACCGCCCTCACCCAGGCCACCTCCgagacctccctgcctcccGCCGGACACAAGTACAGgtGGGTGCTGCTGTACTCCCTGCAGGCGGCGGTCCACGTGGTGCAGGTCACTCTGGGCTACATGCTGATGCTGTGCGTGATGTCATACAACGTATGGATCTTCCTGGGCGTCATCGTGGGCTCTGGGCTCGGCTACTTCGTGGCCTTCCCCCTCCTGCGTCTGCCCTGAGGCGGaggtatagagagagagaagaatttTGAATACACTACAAGAAGGCTTTTGGATTCCCTGTCTCTGCGTCTTACCCtgtgcgtgtctctctctctctttctgctggACAGACAGCCTCTTGTACCAGTAGGAGGCTGGAAAAGGTCTCTCCCTGTCCTTTTTCTGCAGAATCTCTGTGCGCCACGTCATACTGATTGACAAGGCAAGGCACAGCGGGGTGTCAGGTTAGACTCCACAGGCgaaacaaacatgcagaatTTAAGCCAAGCAAtagggtgtgtgtgttagcaCACCCTGCTCTTCCTCTTTTTTCAATGAACtaatgtgtgggtgtgggtaAACAACTCCCTTACCTAATAAcccatccccccccaccccatcatCTTCAGCCACTTCCCTGCCTCTTGCAAAGCTGCCAGGAAAGAAAATAGTTCAGCCAatctaaatataaacaaaccTGCAGGTGTGTGACATGCgagtgtcagtgtgagagtTTGAGTGTGAATGTGCGTGTAACACAAACCCCAACTACGTGGTCTGCGAGTCATCTTCCCACCCCGGGACGGTGACATAGCCGCGAGCCCATGCCGTAATTAGACCAGAGCGTCACGTCTGTTTGCTGCCCGCAGATCCCTGTAAGTGCTGCCTGACCAGTACTTTTGTGGTCATGTGGTTCCCCGAGGCCCAGGCGTCCAGCGTTGAGGTCAGGGCGAGATGAAGGACTGGTCTGATTTGCGGCTGTCTGGGCGACTGCAAAAACAGGCCCTCCAGCCCTGGTCATCGTAGTGGCAAAACAGACCATGACgtttaaaaaagttatacaggtacattttctttttttttttaccatagcATCCGTTTCTTTAGAAGGgtgtgtattgttattttttcttcctttcttaaACCTGCTTTGTACTTTGAACCTCTCTGAAGTGATTACATGTGCTTTTCCCAGATTATAAGGCTCAGCTCAGTTTGGCCGGAGTAAAATTACTGGCTACTGTGAACTATGAAGTAGACAGTTTGggagctgggggtgggggggcacagaAATGAGCTGTTTGACTGTCCTCAGCCTCTCTGTGCCTTATGAATCAGTTACCACCCTCAAGGtcaagatttttttgtttttttgttttttttttactacttgCATTGATGTGCAATATAAATCATGTGGAtctataaaatgttttgaagaaacacagggggagggggagtggAGAACCTGCAGGAGTGCTTGCAGCAGCATCTTTACATAATGTTTATCCTCCTCCAGGGGGGGCTGTGTGGTTCTCTCTGTCCCTGAAGCTGCACACTAGCCACAAACAGCttcaatg

Function

GO: NA

KEGG:

id description
K14687 SLC31A2, CTR2; solute carrier family 31 (copper transporter), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020206 True 1934 mRNA 0.51 5 13248757 13255291

Neighbor

gene id symbol gene type direction distance location
AMCG00020192 NA coding upstream 433425 12802058 ~ 12815332 (+)
AMCG00020191 nrarpa,nrarp coding upstream 513544 12734875 ~ 12735213 (+)
AMCG00020187 NA coding upstream 558412 12664908 ~ 12690345 (+)
AMCG00020181 NA coding upstream 594014 12652216 ~ 12654743 (+)
AMCG00020182 NA coding upstream 596993 12651159 ~ 12651764 (+)
AMCG00020213 LOC102780640 coding downstream 48119 13303410 ~ 13330177 (+)
AMCG00020218 NA coding downstream 181451 13436742 ~ 13451791 (+)
AMCG00020217 pou5f3 coding downstream 201388 13456679 ~ 13461481 (+)
AMCG00020225 NA coding downstream 258263 13513554 ~ 13516767 (+)
AMCG00020223 abca2 coding downstream 290120 13545411 ~ 13579175 (+)
G61588 NA non-coding upstream 250530 12997850 ~ 12998227 (+)
G61568 NA non-coding upstream 396693 12829972 ~ 12852064 (+)
G61460 NA non-coding upstream 663101 12582261 ~ 12585656 (+)
G61435 NA non-coding upstream 742158 12417810 ~ 12506599 (+)
G61440 NA non-coding upstream 744158 12484377 ~ 12504599 (+)
G61650 NA non-coding downstream 81705 13336996 ~ 13338088 (+)
G61668 NA non-coding downstream 85662 13340953 ~ 13341315 (+)
G61669 NA non-coding downstream 86188 13341479 ~ 13341699 (+)
G61670 NA non-coding downstream 87389 13342680 ~ 13343013 (+)
G61671 NA non-coding downstream 87852 13343143 ~ 13343381 (+)
G61491 NA other upstream 628940 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 706496 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 833806 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 1948725 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 2279159 10945592 ~ 10969598 (+)
G61675 NA other downstream 94386 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 531723 13787014 ~ 13792944 (+)
G61894 NA other downstream 577879 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 608186 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 627534 13882825 ~ 13885116 (+)

Expression


Co-expression Network