AMCG00020226


Basic Information

Item Value
gene id AMCG00020226
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13592096 ~ 13595451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020226
TGTGCAGTATGTGCTTAGCGGTTCATTGTCATGGCAGCGCAGTCGGTCACTCGCAGTCTGCAGGTGGTGGACACAGAGCTGAGTGCGGACGCAGTGGAGTGGTGCCCTGTGCCCAGATGGCACAACCTGCTTGCCTGTGGGACCTATCAGCTGCAGAGTCCACCGGAGGGGacagggGAGGGGGCTAACTCCCCCAGGCGTGTGGGCCGGCTGTACCTGTTCCAGTTCAGCCAAGCTGGGGGTCTGTTTCCCCCCCTGCAGGAGCTGCAGCGCCTAGATACTCCTGGCATCCTGGACATCAAGTGGTGTCATGTGCCCATGTCAGAGCGCCCCCTGCTGGGCTGTGCCATGGCCAGCGGAGAGCTGCAGCTgtacagactgacagacactcagGAAGCCAGCTGTGCTCTGGAGGCAGTCTCCAGTTTAGAGCTGGGCCCTGATAGGCTGGCCCTGTCCCTTGACTGGTCCACTGGGCGGGGTGACAGCAGTGCAATGCAGGTGGTGCTGAGTGACTCTGTGGGAGGAATCAGTGTGGTGTCAGTGGGGGCATCAGGGCCAAGCCTGCTGTCCCAGTGGAAGGGCCACAACTTTGAGGCCTGGATCTCAGCCTTCAGTTACTGGGACACACAGCTGCTGTACTCAGGGGGTGATGACTGCAGGCTGAAGGGCTGGGACCTGAGGATTGGGCCGACCCCTGTGTTCACCAGCAAGAGGCATTCGATGGGTGTGTGCAGTATCCATAGCAACCCTCACCGTGAGCATATTCTGGCCACGGGCAGCTATGACGAGACTGTGCTGCTGTGGGATGGGCGGAGCCTGCGGGAGCCGCTGGCGGAGCAGGCGGTCGGGGGGGGCGTATGGCGGCTAAAGTGGCACCCAACGCAACAGCACCTCCTGCTGGCGGCCTGCATGCACAACAACTTCCACATCCTGGACTGCCACTCTGCACTAGAGGGGGGCAGTGTCCAGCAGTGTCCAGTCCTGGCCTCCTACATCCTGCACAACTCTCTGGCCTATGGGGCAGATTGGTCTCACTTGGACCCCAGGGAGGGGTCTCCCTGCACCCCCCCAATGCACCCGAACAGCAGGGGAGATGCAGAGGGCAAGGAAGAGATGGagcagaaagaggagagagagggagcaggagggTCAGGCCGGGGGGGGCACCTGCGCATTCAGTACGAGTCGCCCACCGCCAGCTTTGACACCTCCCTGGAAGACGAGGCTGGGCGATACATCCCCTCCCCCTCGCCCTCACCCCCACCCATGCCAATGCCATCCAGCAATGCCCCCCCCTGCTCCAGCCTGCTGGCCAGCTGCTCCTTCTATGACCACGTGCTGCATGTGTGGCGCTGGGACTGGCACCCAGACAGGTTGTCGGGCAGTACCCACATCAACACTGATACACTgggggagggaaaggggggaggggagggagaggaggcgTGA

Function

GO: NA

KEGG:

id description
K17868 DPH7, RRT2; diphthine methyl ester acylhydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020226 True 1452 mRNA 0.62 9 13592096 13595451

Neighbor

gene id symbol gene type direction distance location
AMCG00020222 clic4,LOC107661585,LOC107595720,LOC108436785,LOC106563124,LOC107692326,LOC107736903 coding upstream 6146 13583281 ~ 13585950 (+)
AMCG00020223 abca2 coding upstream 12921 13545411 ~ 13579175 (+)
AMCG00020225 NA coding upstream 75329 13513554 ~ 13516767 (+)
AMCG00020217 pou5f3 coding upstream 130615 13456679 ~ 13461481 (+)
AMCG00020218 NA coding upstream 140305 13436742 ~ 13451791 (+)
AMCG00020228 NA coding downstream 2518 13597969 ~ 13613378 (+)
AMCG00020227 NA coding downstream 30412 13625863 ~ 13639928 (+)
AMCG00020232 NA coding downstream 137189 13732640 ~ 13736452 (+)
AMCG00020247 NA coding downstream 159484 13754935 ~ 13759675 (+)
AMCG00020242 ssna1,LOC107697981,LOC107684356,LOC107730341,LOC107559739 coding downstream 226310 13821761 ~ 13824208 (+)
G61676 NA non-coding upstream 240562 13351248 ~ 13351534 (+)
G61674 NA non-coding upstream 242950 13348855 ~ 13349146 (+)
G61672 NA non-coding upstream 248057 13343757 ~ 13344039 (+)
G61671 NA non-coding upstream 248715 13343143 ~ 13343381 (+)
G61670 NA non-coding upstream 249083 13342680 ~ 13343013 (+)
G61774 NA non-coding downstream 63 13595514 ~ 13596726 (+)
G61841 NA non-coding downstream 113384 13708835 ~ 13709496 (+)
G61871 LOC100846954 non-coding downstream 155636 13751087 ~ 13751363 (+)
G61904 NA non-coding downstream 281860 13877311 ~ 13930740 (+)
G61895 NA non-coding downstream 292700 13888151 ~ 13890428 (+)
G61675 NA other upstream 241384 13349677 ~ 13350712 (+)
G61491 NA other upstream 972279 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 1049835 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 1177145 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 2292064 11274024 ~ 11300032 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 191563 13787014 ~ 13792944 (+)
G61894 NA other downstream 237719 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 268026 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 287374 13882825 ~ 13885116 (+)
AMCG00020267 NA other downstream 352975 13948426 ~ 13951047 (+)

Expression


Co-expression Network