AMCG00020528


Basic Information

Item Value
gene id AMCG00020528
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 24057094 ~ 24062675 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020528
ATGTCTGGCACAGGTGGCGAGACAAATCCAGGTGACCAGGTTCAGCTGAGTATGGCCCAGATGCAGTGTGGCAAACTGGCCACTGACGAGTTCTTCTGTCTGTCCTTGTCCCTGCTGGGCcatcacaacacacagcaccagTTCCTAGAGCTGATAGAGCCTCTGGCAGTGGGCTATGAGCAACTGCATACCAGCCTCACTGCAATCTACCTGGAATACTTCACACAGTGGCCCTTTCGTGCAGGCTTGTCCCCCAGTGACGAGGAGGTAGCAGTGGAGATGGCTCTGGCACTGTCCCTGGCAGAGGTGACAGAGAAGGAGCAGTCTTCCTCACATCCTAACCTTAAATCAGAAGCAAGGGAACCCAAAAAGAGAGGGTGGGAAATCCGGCACAGAGGACAATCCCCAGACAGCAAGGAGGTCAATCTCTGCACAGCTGCTGGGGCAACTCAGGCTGAGAAGAGAGCAGGAGTCAGGGGGTCAAGGCAGGTGTATCTGGGGCTGGAGTGGGTGACCTCAGACAGTGGAGATGTTCCAGTGGAGGTCAAAATGTCCTTAAGTAAATCGTTGAAGAGTCTAGGCAACCAACTTGTGATACGGCAAGAGGAGACAACATCCCAGCATGCTTTGCAGGACCTAGTTTCTGAGACTGAGGTAGGCAGTGTGTTGGAAAATGTGCTATACAAGCCTTGGATCAAAGAACTCGATGAGCTGGCCTCCTCAGCACTCAGGAGCCAGGGGACGAGTTGCCAGCTGTATTATTCATACTGCCTGCGAGATCCAGAGTTGGTCAGCACTGTGGGAGTGGGCCTCAGAGGAATAGGTTGTCTCTCACAGTTGCTTTCAGCAGAACCCAGGTCCAAGGCTGGGACCTCCACTGGATACCCCAGCCAGCCTCCCAGTGCCCACCCAGTGGCCCCAGTCCTGACAACTGGATCAGCTGCAACTAGCCAGGATGCTAAAGAGAAAGGATGGCACAACGGGTGGACTGGGCAGCCACAATCCGCAGCTCCTGGAACGTCAGTGAGGAAGGCGCTCAACCCCGGCTGCAAGCCCTCCTCTCTGATGgacaCACTGGTGGACGCAGATGTTGCTATAGCCGCCATGATGTGGCAGAATGGACGTGGCGCCGGTACAGAGGCAGTTAATTGGAGAGTATGTGGACAGGAGTCAGGATGTGACCTAGTGCCTTTGCCCGAGAAGCTGGTCAGGGAAGTGCTGGGTGAGGGTGATCTTGTGCAGACGGGCAGGTGGTTCCTCTTGCCCGTTATCACAAACAAACAGTTCCAGCACCAGACGCTGGAGCCCGACTCCGAGACCAACCCTTTCAAAGTCACAAACGGGATGAGACCATGGCATTCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020528 True 1365 mRNA 0.55 6 24057094 24062675

Neighbor

gene id symbol gene type direction distance location
AMCG00020522 NA coding upstream 85520 23925180 ~ 23971574 (+)
AMCG00020520 NA coding upstream 199291 23813512 ~ 23857803 (+)
AMCG00020517 zfhx3 coding upstream 374792 23657711 ~ 23682302 (+)
AMCG00020519 zfhx3,LOC105888974,LOC106533552 coding upstream 445948 23608590 ~ 23611146 (+)
AMCG00020518 zfhx3 coding upstream 474354 23575106 ~ 23582740 (+)
AMCG00020530 psmd7,LOC107584693,LOC107659147,LOC107553010 coding downstream 97602 24160277 ~ 24163714 (+)
AMCG00020535 NA coding downstream 139639 24202314 ~ 24210374 (+)
AMCG00020536 NA coding downstream 153396 24216071 ~ 24225069 (+)
AMCG00020534 LOC104940465,LOC106520303,LOC103466051 coding downstream 163326 24226001 ~ 24232399 (+)
AMCG00020532 NA coding downstream 182866 24245541 ~ 24249251 (+)
G63898 LOC108433019,LOC103398424 non-coding upstream 157340 23898507 ~ 23899754 (+)
G63890 NA non-coding upstream 159339 23850350 ~ 23897755 (+)
G63789 NA non-coding upstream 970161 23086378 ~ 23086933 (+)
G63787 NA non-coding upstream 979781 23076901 ~ 23077313 (+)
G63784 NA non-coding upstream 986945 23068311 ~ 23070149 (+)
G63947 NA non-coding downstream 8041 24070716 ~ 24072160 (+)
G63948 kars,LOC107738348,LOC107584690,LOC107679917 non-coding downstream 12374 24075049 ~ 24076475 (+)
G63951 NA non-coding downstream 25839 24088514 ~ 24093237 (+)
G64009 NA non-coding downstream 170064 24232739 ~ 24242677 (+)
G64048 NA non-coding downstream 426229 24488904 ~ 24565492 (+)
G63939 NA other upstream 1502 24051989 ~ 24055592 (+)
G63786 znf821,LOC107747380 other upstream 982149 23070411 ~ 23074945 (+)
AMCG00020505 NA other upstream 994945 23053798 ~ 23062149 (+)
AMCG00020487 NA other upstream 1647601 22356174 ~ 22409493 (+)
AMCG00020470 NA other upstream 1914896 22135368 ~ 22142198 (+)
G64046 NA other downstream 416160 24478835 ~ 24482114 (+)
AMCG00020572 NA other downstream 999698 25062373 ~ 25076690 (+)
AMCG00020573 NA other downstream 1015467 25078142 ~ 25084873 (+)
AMCG00020585 NA other downstream 1396421 25459096 ~ 25472886 (+)
G64372 NA other downstream 1488236 25550911 ~ 25553320 (+)

Expression


Co-expression Network