AMCG00020574


Basic Information

Item Value
gene id AMCG00020574
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 24972749 ~ 25001128 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020574
ACCTTGCAGTCGTTCAGCTTCAgtgaactacatttcccagaaagCCAGTGGTGTACACTGGGTCTCCATAGCTACCACACGCTGGTTCCCGTGTCCAGGAAGGAGAAGGTCCTGGAGGAATACAGGCAGGGCTCTCTGTCTCATACACATAAAGATCCTGCCCCTCTTCAACTAGATGCCACTACAGACCCACAAGAGCTGAGACGAGGCCGGTTCTCTGAGGTTTTCAGTGATACAGAGAGCAGTGCAGGGGAAGACGAGGAGTCGGGTGAAGAGGAAGACTGGGAGAAGTTCGACAGCAGAGTAAATGAGTTCCTGCTGGCGGCAAAAGATCGTCGATCTCAGAGGCTCAGAACAGTCGAGAAGAAGGAGATTCCCCCTCGTGCTGTGGGGATCGAGTCCTTAATTGTGGCTGCAGCCACGTATGAAGTGAAACGTCTGAAGTGTGGCGAGAGGGTGCTGCAGCTGGCCCTGCTATCCACAAGGAAGAGATACAAACAATGTGGAGCTGGCCGATACCTCCTAGAGCTGCTGAAAGACGCTTCTGTCTGTGGCTCTTACCATGCCCTGCTGACACATGCGGACTCAGACGCTGTCCCTTTCTTCTCCAAGTGCGGGTTTACAGATGACATCCTTCTCAACAATAAATTCAGGTACCAAAAAGCACAGGGACAGGCAGTTTGCATGAGCAGGCTACTCCACGAGGTTCAAATCCTGAGGAAAGAGCTTGTCTCACAGAAGGAGCAGATTGACAGCCTGAGCcaagagctggagagagagaggcagcgcAGGCACATGACAGAGCAGCGCTTTCTGGAGTACAGGCTGGAGAAGACAAGGCAGATCCTGGATATGAGCAGTCTCAGCTCAGATGAGCAGGACCATGAGAGCTCTGCAGACGTGTGCCCATGGATGGGAGAGGAGAATGAGAATAGCACCAAACAAGGTCCGTCAACAAAACACAGGGAAGTGACAGAGATTGCACAGTAAGACAAGGTGACCCTCAGCCTCGCTCCCAGGGATCAATCTGAATCATTCTGTCCTTCGAGGCATCACCCAGGTCCTAATGGGAAGTGAAGCAGTCTGCCATGCAGCTTGCTTAGCACTGATCACAGGCTTTGAACATTGCTCATGGTATACCTGTGGGGCCGTGACTTCAATCACTGTTTGTAATCACAGTGCTTGAGGGACTCTTTAAAATCTGCCCTAGAGATTGAGTTAACCTCGGCTAGAGACCACTACTTTCCTGTTTTACTGCCTcagaatacaatgtattttaaagaactgCTTTTAGAAAAGgttgtgatgttgtttttttaatctctaaaataaattaagatctGTCGAACTGTGAAATGATAGATGCACTAATTTATGTTTACTTTAGTTCTTTGAGTGTGGTGTTCATGTCTGACAGTGAGCAGCTTTCATTGGTTGTGAGGTTTAAATCATTTCCCAACGATTGAGAAATTGTTCtatatatttgaacaaaatctaaaaatctTGAACCCATTGTattcaataacaacaacaaaaatcataaCAATGTTCATGAACACAAGGAGACGTCAGGTATTTagtttatgaaatgtattaacagTGTTATGGATTTCAGCACACTATTTgcaacatacagtgcatccagaaagtattcacagcgcttcactttttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020574 True 1672 mRNA 0.47 10 24972749 25001128

Neighbor

gene id symbol gene type direction distance location
AMCG00020575 NA coding downstream 21876 24947221 ~ 24950873 (-)
AMCG00020566 znrf1,LOC106573647 coding downstream 126321 24843010 ~ 24846428 (-)
AMCG00020564 NA coding downstream 151688 24814766 ~ 24821061 (-)
AMCG00020565 NA coding downstream 171966 24791942 ~ 24800783 (-)
AMCG00020554 NA coding downstream 336398 24631379 ~ 24636351 (-)
AMCG00020592 polr2c coding upstream 324665 25325793 ~ 25329845 (-)
AMCG00020591 LOC102778684,LOC107573013 coding upstream 329945 25331073 ~ 25348318 (-)
AMCG00020594 gabarapl2,LOC107560072 coding upstream 472127 25473255 ~ 25479762 (-)
AMCG00020597 NA coding upstream 550462 25551590 ~ 25552969 (-)
AMCG00020595 chmp1a,LOC106573671 coding upstream 564455 25565583 ~ 25574610 (-)
G64186 NA non-coding downstream 26539 24945298 ~ 24946210 (-)
G64170 NA non-coding downstream 116125 24854936 ~ 24856624 (-)
G64126 NA non-coding downstream 271413 24701133 ~ 24701336 (-)
G64120 NA non-coding downstream 284989 24685524 ~ 24687760 (-)
G64028 NA non-coding downstream 667814 24304484 ~ 24304935 (-)
G64213 NA non-coding upstream 219 25001347 ~ 25001657 (-)
G64218 NA non-coding upstream 51076 25052204 ~ 25052452 (-)
G64221 NA non-coding upstream 63008 25064136 ~ 25064342 (-)
G64235 NA non-coding upstream 92903 25094031 ~ 25094326 (-)
G64238 NA non-coding upstream 98909 25100037 ~ 25101087 (-)
AMCG00020560 NA other downstream 196340 24753882 ~ 24776409 (-)
AMCG00020559 NA other downstream 273802 24691893 ~ 24698947 (-)
AMCG00020561 NA other downstream 294939 24648003 ~ 24677810 (-)
G63819 NA other downstream 1810849 23154692 ~ 23161900 (-)
G63679 NA other downstream 2428060 22543842 ~ 22544689 (-)
AMCG00020581 NA other upstream 109982 25111110 ~ 25119596 (-)
G64247 NA other upstream 119970 25121098 ~ 25139385 (-)
G64260 NA other upstream 207931 25209059 ~ 25211063 (-)
G64271 NA other upstream 241041 25242169 ~ 25242511 (-)
AMCG00020589 NA other upstream 271465 25272593 ~ 25284209 (-)

Expression


Co-expression Network