AMCG00020599


Basic Information

Item Value
gene id AMCG00020599
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25601120 ~ 25610390 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020599
GGCttacaggatttattttatttcttccgATTTTCTGAACTGCATTTTGTGTTCATTGGGATTTGCCATCAGGCAGGATGTCTAATTCTGACAGAGTAGTTCTGGCGCTTGGAGGGGCTGGCACGGTGGGGTCCGGAATCGTAAAAGCGCTTCTGGATAGAGGTTTCCGGGTGGCAGTGATCTCCAGAGATGAGAGCAGACTGGAGAAGCTCAAGACCTTCATCAGCCCTGCCACCAAAGACAACCTCTACACTCTGGTGGGGGATGTGGGCACTGAGGAAGGAGCAGAGATCGCCAAGAACAACCTGCTGAAGAGTGTGGGCAAGGTGACGGACGTTGTCTCGTCTCTGGGTTTCAGCTGGTGGCAGGGtggccccccacacacacagtctctcaaGGAGTTGCATCGGGTTCTGGAGACTTTAGTTTTGAGCACTTTCACGTCGTGGAAAGCTTTCTTCCCCTTGGTGAAGGATTGTTCCAGTggaacatatacatttataactgGGGGCGCGGGCGAGAAGCTTCTGATGCCCGGGACGGGGTTCCTGACTCTGGGAGCAGCGGCCACCCTTGCATTCTGCCAGATAGTGAGGGAGGAGTATCCAGAGGTGCCATGCAAACTGAATGAGGTGAAGGTCAATACAGGAGTGGCCCCCCCAGAGCGCATGCGCCCCGGGTACATCAACCACCTGGACCTGGGGGAGGCTGTGGCATCGCTGGTGGAGAGAAGGAACGAATCTCACAAGGTCTTCAATGTCAGCAACTCCGCTGACCTGAAGACAGTTATCCTGGACGGAAAGGTCTAAGGTCTACACCCCGACCCCCCAGCACAAGGCACTCCCACATTCAGACCCCCACCTTAGggtttgcttttttccccaccattttttccccctgcctGCCTTCAAAGCCTCTCTACATTACCACAGCCCTTTCCCTGGTGTTTCACTGCACAGTAGTTGAAAAGCATTGCTTCGATCTCTAACTAGTTACATTTTTGCTCCCAGACACCTCAGCACTTCCAGAGAAATCCAACTTACATTGATGCATAAACAATACTTATATCAGAACATTTCCATGCTGGTAAAGACAGGAGACAGACTCAGACACAGGGAACTTGCAATGAAGTAAAGGAGTTGGCGTAAACCAAgataaaaaggttaaaataaatactgaaaaggCTAATTGGACAGCTGAGCCCTGAATATTTAGCACGCTCTGATTGGTTAGTATGTGTGATAATGCATATTCCTTACTGCACAAAGCCgtttaaaatgaattgtgtatttcaatatatttatcattttcttCTAAATCGATTTGGTTGTTGATTTATTTGGACTTATGTTGCTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020599 True 1360 mRNA 0.48 6 25601120 25610390

Neighbor

gene id symbol gene type direction distance location
AMCG00020600 cdk10 coding upstream 12369 25579705 ~ 25588751 (+)
AMCG00020596 NA coding upstream 68757 25531176 ~ 25532363 (+)
AMCG00020593 NA coding upstream 108825 25487947 ~ 25492295 (+)
AMCG00020586 wwp2,LOC107740243,LOC108439047 coding upstream 143025 25405634 ~ 25458095 (+)
AMCG00020588 NA coding upstream 208259 25376181 ~ 25392861 (+)
AMCG00020598 znf276,zgc:158366 coding downstream 71226 25681616 ~ 25687176 (+)
AMCG00020609 snta1,LOC107560074,LOC107728410,LOC107667670,LOC107744389 coding downstream 171658 25782048 ~ 25783248 (+)
AMCG00020608 sntb2,LOC106573669,LOC106560900 coding downstream 199776 25810166 ~ 25811675 (+)
AMCG00020606 sntb2 coding downstream 229314 25839704 ~ 25854564 (+)
AMCG00020607 vps4a,LOC106939979 coding downstream 244698 25855088 ~ 25861732 (+)
G64378 NA non-coding upstream 29358 25569390 ~ 25571762 (+)
G64362 NA non-coding upstream 65073 25535753 ~ 25536047 (+)
G64300 NA non-coding upstream 267438 25332259 ~ 25333682 (+)
G64297 NA non-coding upstream 270562 25330081 ~ 25330558 (+)
G64269 NA non-coding upstream 334913 25263406 ~ 25266207 (+)
G64394 NA non-coding downstream 30203 25640593 ~ 25643374 (+)
G64406 NA non-coding downstream 111543 25721933 ~ 25728334 (+)
G64436 NA non-coding downstream 209001 25819391 ~ 25819782 (+)
G64457 NA non-coding downstream 283760 25894150 ~ 25895525 (+)
G64478 NA non-coding downstream 324515 25934905 ~ 25940113 (+)
G64372 NA other upstream 47800 25550911 ~ 25553320 (+)
AMCG00020585 NA other upstream 128234 25459096 ~ 25472886 (+)
AMCG00020573 NA other upstream 516247 25078142 ~ 25084873 (+)
AMCG00020572 NA other upstream 524430 25062373 ~ 25076690 (+)
G64046 NA other upstream 1119006 24478835 ~ 24482114 (+)
AMCG00020603 NA other downstream 151745 25762135 ~ 25778982 (+)
AMCG00020621 LOC105904655 other downstream 444897 26055287 ~ 26096957 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other downstream 1805606 27415996 ~ 27418520 (+)
G64887 NA other downstream 3263240 28873630 ~ 28874072 (+)
G64908 NA other downstream 3398273 29008663 ~ 29009601 (+)

Expression


Co-expression Network