Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020616 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 25877255 ~ 25885079 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016491 | oxidoreductase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020616 | True | 654 | mRNA | 0.50 | 7 | 25877255 | 25885079 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020607 | vps4a,LOC106939979 | coding | upstream | 15523 | 25855088 ~ 25861732 (+) |
| AMCG00020606 | sntb2 | coding | upstream | 22691 | 25839704 ~ 25854564 (+) |
| AMCG00020608 | sntb2,LOC106573669,LOC106560900 | coding | upstream | 65580 | 25810166 ~ 25811675 (+) |
| AMCG00020609 | snta1,LOC107560074,LOC107728410,LOC107667670,LOC107744389 | coding | upstream | 94007 | 25782048 ~ 25783248 (+) |
| AMCG00020598 | znf276,zgc:158366 | coding | upstream | 190079 | 25681616 ~ 25687176 (+) |
| AMCG00020611 | NA | coding | downstream | 35560 | 25920639 ~ 25932142 (+) |
| AMCG00020610 | cotl1,LOC107684658,LOC107587015,LOC107559813,LOC107722478,LOC107738394 | coding | downstream | 87454 | 25972533 ~ 25989687 (+) |
| AMCG00020617 | NA | coding | downstream | 131812 | 26016891 ~ 26029449 (+) |
| AMCG00020624 | NA | coding | downstream | 335551 | 26220630 ~ 26230564 (+) |
| AMCG00020626 | NA | coding | downstream | 542847 | 26427926 ~ 26428763 (+) |
| G64436 | NA | non-coding | upstream | 57473 | 25819391 ~ 25819782 (+) |
| G64406 | NA | non-coding | upstream | 148921 | 25721933 ~ 25728334 (+) |
| G64394 | NA | non-coding | upstream | 233881 | 25640593 ~ 25643374 (+) |
| G64378 | NA | non-coding | upstream | 305493 | 25569390 ~ 25571762 (+) |
| G64362 | NA | non-coding | upstream | 341208 | 25535753 ~ 25536047 (+) |
| G64457 | NA | non-coding | downstream | 9071 | 25894150 ~ 25895525 (+) |
| G64478 | NA | non-coding | downstream | 49826 | 25934905 ~ 25940113 (+) |
| G64555 | NA | non-coding | downstream | 310134 | 26195213 ~ 26197405 (+) |
| G64556 | NA | non-coding | downstream | 315985 | 26201064 ~ 26202040 (+) |
| G64557 | NA | non-coding | downstream | 322505 | 26207584 ~ 26207838 (+) |
| AMCG00020603 | NA | other | upstream | 98273 | 25762135 ~ 25778982 (+) |
| G64372 | NA | other | upstream | 323935 | 25550911 ~ 25553320 (+) |
| AMCG00020585 | NA | other | upstream | 404369 | 25459096 ~ 25472886 (+) |
| AMCG00020573 | NA | other | upstream | 792382 | 25078142 ~ 25084873 (+) |
| AMCG00020572 | NA | other | upstream | 800565 | 25062373 ~ 25076690 (+) |
| AMCG00020621 | LOC105904655 | other | downstream | 170208 | 26055287 ~ 26096957 (+) |
| G64730 | hsbp1,LOC102784925,LOC102222837,LOC103023435 | other | downstream | 1530917 | 27415996 ~ 27418520 (+) |
| G64887 | NA | other | downstream | 2988551 | 28873630 ~ 28874072 (+) |
| G64908 | NA | other | downstream | 3123584 | 29008663 ~ 29009601 (+) |
| G64979 | NA | other | downstream | 3579485 | 29464564 ~ 29465712 (+) |
