AMCG00020623 (cmip,LOC106573687,LOC106560887)


Basic Information

Item Value
gene id AMCG00020623
gene name cmip,LOC106573687,LOC106560887
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 26178949 ~ 26179335 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020623
ATGGATTTCAATAGCAGCTCGGGTGGAGGCAGCGAACTCCACAACAATCACCAATACCAGTCGGAGGAGAGCAAACCCTTGCTGGGCGAGATGTCCGCCTTGGCACCGGCGGAGGGGAATAATAAAATGGGGGCCGCACCGTGTCGGAGAGTCCTGCTGCACTGCAATGGGATGAGGTACAAACTGCTGCAGGAGGGGGACATCCAAGTGTGTGTCATTAAACACCCCAGGACCTTTCTGAGCAAGCTGCTCACTTCCAAGTACTTGAGAAGATGGGAGCCCCATCACCTGACGCTCACGGATAACAGTCTGGCTTCGGCGACAGTAAGTACCGCATTTTCTCCtcctctgcctgcctgcctgccattGATCCGAGCGGTGATCTGA

Function

symbol description
cmip Predicted to be active in cytosol and nucleoplasm. Orthologous to human CMIP (c-Maf inducing protein).

NR:

description
PREDICTED: C-Maf-inducing protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020623 True 387 mRNA 0.56 1 26178949 26179335

Neighbor

gene id symbol gene type direction distance location
AMCG00020622 cmip coding downstream 49930 26109019 ~ 26129019 (-)
AMCG00020619 NA coding downstream 125221 26021742 ~ 26053728 (-)
AMCG00020618 NA coding downstream 207149 25966140 ~ 25971800 (-)
AMCG00020620 NA coding downstream 213642 25960378 ~ 25965307 (-)
AMCG00020615 NA coding downstream 261176 25910562 ~ 25917773 (-)
AMCG00020625 NA coding upstream 20536 26199871 ~ 26216813 (-)
AMCG00020628 NA coding upstream 193451 26372786 ~ 26393051 (-)
AMCG00020627 NA coding upstream 236640 26415975 ~ 26442453 (-)
AMCG00020635 NA coding upstream 923066 27102401 ~ 27108280 (-)
AMCG00020647 NA coding upstream 1080517 27259852 ~ 27269443 (-)
G64510 NA non-coding downstream 189260 25985448 ~ 25989689 (-)
G64477 NA non-coding downstream 246807 25931699 ~ 25932142 (-)
G64418 NA non-coding downstream 399738 25691408 ~ 25779211 (-)
G64412 NA non-coding downstream 535576 25640570 ~ 25643373 (-)
G64342 NA non-coding downstream 713599 25464877 ~ 25465350 (-)
G64562 NA non-coding upstream 12226 26191561 ~ 26192678 (-)
G64608 NA non-coding upstream 247815 26427150 ~ 26428274 (-)
G64625 NA non-coding upstream 392167 26571502 ~ 26571716 (-)
G64627 NA non-coding upstream 456253 26635588 ~ 26635788 (-)
G64629 NA non-coding upstream 550520 26729855 ~ 26730111 (-)
AMCG00020613 NA other downstream 230606 25934901 ~ 25948343 (-)
G64470 NA other downstream 260319 25898428 ~ 25918630 (-)
AMCG00020614 NA other downstream 273351 25886050 ~ 25905598 (-)
AMCG00020604 NA other downstream 463492 25687275 ~ 25715457 (-)
G64298 NA other downstream 848379 25330084 ~ 25330570 (-)
AMCG00020639 LOC107583916 other upstream 1066679 27246014 ~ 27249676 (-)
AMCG00020657 NA other upstream 1982267 28161602 ~ 28239074 (-)
G64811 NA other upstream 2047200 28226535 ~ 28229647 (-)
AMCG00020661 ss18l2 other upstream 2145702 28325037 ~ 28328312 (-)
G64882 NA other upstream 2609245 28788580 ~ 28796956 (-)

Expression


Co-expression Network