Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020635 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 27102401 ~ 27108280 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004997 | thyrotropin-releasing hormone receptor activity | molecular_function |
| id | description |
|---|---|
| K04282 | TRHR; thyrotropin-releasing hormone receptor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020635 | True | 1236 | mRNA | 0.54 | 3 | 27102401 | 27108280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020627 | NA | coding | downstream | 659948 | 26415975 ~ 26442453 (-) |
| AMCG00020628 | NA | coding | downstream | 709350 | 26372786 ~ 26393051 (-) |
| AMCG00020625 | NA | coding | downstream | 885588 | 26199871 ~ 26216813 (-) |
| AMCG00020623 | cmip,LOC106573687,LOC106560887 | coding | downstream | 923066 | 26178949 ~ 26179335 (-) |
| AMCG00020622 | cmip | coding | downstream | 973382 | 26109019 ~ 26129019 (-) |
| AMCG00020647 | NA | coding | upstream | 151572 | 27259852 ~ 27269443 (-) |
| AMCG00020644 | NA | coding | upstream | 173335 | 27281615 ~ 27286072 (-) |
| AMCG00020643 | si:dkey-246g23.2,LOC107684666,LOC107749300,LOC107553994,LOC107670153,LOC107738383 | coding | upstream | 298675 | 27406955 ~ 27408112 (-) |
| AMCG00020645 | zgc:173742,LOC107684664,LOC107749320,LOC107553995,LOC108415671 | coding | upstream | 312768 | 27421048 ~ 27425477 (-) |
| AMCG00020646 | zgc:173742,LOC108415671,LOC107553995,LOC107684664,LOC107749320,LOC108264272 | coding | upstream | 327389 | 27435669 ~ 27474732 (-) |
| G64632 | NA | non-coding | downstream | 356578 | 26745549 ~ 26745823 (-) |
| G64630 | NA | non-coding | downstream | 370113 | 26731435 ~ 26732288 (-) |
| G64629 | NA | non-coding | downstream | 372290 | 26729855 ~ 26730111 (-) |
| G64627 | NA | non-coding | downstream | 466613 | 26635588 ~ 26635788 (-) |
| G64625 | NA | non-coding | downstream | 530685 | 26571502 ~ 26571716 (-) |
| G64708 | NA | non-coding | upstream | 127803 | 27236083 ~ 27236322 (-) |
| G64745 | NA | non-coding | upstream | 312086 | 27420366 ~ 27420646 (-) |
| G64847 | NA | non-coding | upstream | 1208489 | 28316769 ~ 28323164 (-) |
| G64886 | NA | non-coding | upstream | 1749709 | 28857989 ~ 28858354 (-) |
| G64912 | NA | non-coding | upstream | 1888112 | 28996392 ~ 29001633 (-) |
| AMCG00020613 | NA | other | downstream | 1154058 | 25934901 ~ 25948343 (-) |
| G64470 | NA | other | downstream | 1183771 | 25898428 ~ 25918630 (-) |
| AMCG00020614 | NA | other | downstream | 1196803 | 25886050 ~ 25905598 (-) |
| AMCG00020604 | NA | other | downstream | 1386944 | 25687275 ~ 25715457 (-) |
| G64298 | NA | other | downstream | 1771831 | 25330084 ~ 25330570 (-) |
| AMCG00020639 | LOC107583916 | other | upstream | 137734 | 27246014 ~ 27249676 (-) |
| AMCG00020657 | NA | other | upstream | 1053322 | 28161602 ~ 28239074 (-) |
| G64811 | NA | other | upstream | 1118255 | 28226535 ~ 28229647 (-) |
| AMCG00020661 | ss18l2 | other | upstream | 1216757 | 28325037 ~ 28328312 (-) |
| G64882 | NA | other | upstream | 1680300 | 28788580 ~ 28796956 (-) |
